Hb_004970_040

Information

Type -
Description -
Location Contig4970: 26237-27696
Sequence    

Annotation

kegg
ID pop:POPTR_0014s02640g
description hypothetical protein
nr
ID XP_012068325.1
description PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
swissprot
ID O65351
description Subtilisin-like protease SBT1.7 OS=Arabidopsis thaliana GN=SBT1.7 PE=1 SV=1
trembl
ID A0A067LCD1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16116 PE=4 SV=1
Gene Ontology
ID GO:0004252
description subtilisin-like protease

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004970_040 0.0 - - PREDICTED: subtilisin-like protease SBT1.7 [Jatropha curcas]
2 Hb_004529_020 0.2836914205 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
3 Hb_000146_060 0.2874905224 - - -
4 Hb_168893_010 0.2929605174 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Nelumbo nucifera]
5 Hb_000796_060 0.2941400806 - - Glycogenin-2 [Aegilops tauschii]
6 Hb_023528_010 0.294809634 - - hypothetical protein POPTR_0013s01580g [Populus trichocarpa]
7 Hb_048207_010 0.2955535174 - - heat-shock protein, putative [Ricinus communis]
8 Hb_001104_040 0.2957507383 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
9 Hb_001951_120 0.2990986455 - - -
10 Hb_007382_020 0.3001769281 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
11 Hb_160233_020 0.3029691083 - - -
12 Hb_025194_030 0.3038069726 - - PREDICTED: BAG family molecular chaperone regulator 6-like [Jatropha curcas]
13 Hb_001214_170 0.304450903 - - pyruvate kinase family protein [Medicago truncatula]
14 Hb_092043_020 0.3046851654 - - PREDICTED: uncharacterized protein LOC105629509 [Jatropha curcas]
15 Hb_029980_010 0.3089607113 - - PREDICTED: 17.3 kDa class I heat shock protein-like [Jatropha curcas]
16 Hb_184326_010 0.3142321854 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
17 Hb_010555_020 0.3167830284 - - hypothetical protein JCGZ_06771 [Jatropha curcas]
18 Hb_005730_100 0.317953795 - - PREDICTED: 18.2 kDa class I heat shock protein-like [Gossypium raimondii]
19 Hb_000101_220 0.3194068735 - - anthranilate synthase component I, putative [Ricinus communis]
20 Hb_085375_010 0.3195262478 - - protein with unknown function [Ricinus communis]

Gene co-expression network

sample Hb_004970_040 Hb_004970_040 Hb_004529_020 Hb_004529_020 Hb_004970_040--Hb_004529_020 Hb_000146_060 Hb_000146_060 Hb_004970_040--Hb_000146_060 Hb_168893_010 Hb_168893_010 Hb_004970_040--Hb_168893_010 Hb_000796_060 Hb_000796_060 Hb_004970_040--Hb_000796_060 Hb_023528_010 Hb_023528_010 Hb_004970_040--Hb_023528_010 Hb_048207_010 Hb_048207_010 Hb_004970_040--Hb_048207_010 Hb_092043_020 Hb_092043_020 Hb_004529_020--Hb_092043_020 Hb_004529_020--Hb_023528_010 Hb_001104_040 Hb_001104_040 Hb_004529_020--Hb_001104_040 Hb_003793_050 Hb_003793_050 Hb_004529_020--Hb_003793_050 Hb_125948_020 Hb_125948_020 Hb_004529_020--Hb_125948_020 Hb_007943_010 Hb_007943_010 Hb_004529_020--Hb_007943_010 Hb_004330_030 Hb_004330_030 Hb_000146_060--Hb_004330_030 Hb_004939_020 Hb_004939_020 Hb_000146_060--Hb_004939_020 Hb_012107_070 Hb_012107_070 Hb_000146_060--Hb_012107_070 Hb_003362_060 Hb_003362_060 Hb_000146_060--Hb_003362_060 Hb_001214_170 Hb_001214_170 Hb_000146_060--Hb_001214_170 Hb_113823_010 Hb_113823_010 Hb_000146_060--Hb_113823_010 Hb_046198_020 Hb_046198_020 Hb_168893_010--Hb_046198_020 Hb_168893_010--Hb_000796_060 Hb_005730_100 Hb_005730_100 Hb_168893_010--Hb_005730_100 Hb_020156_060 Hb_020156_060 Hb_168893_010--Hb_020156_060 Hb_029980_010 Hb_029980_010 Hb_168893_010--Hb_029980_010 Hb_085375_010 Hb_085375_010 Hb_168893_010--Hb_085375_010 Hb_000796_060--Hb_048207_010 Hb_000796_060--Hb_005730_100 Hb_000796_060--Hb_001104_040 Hb_001279_230 Hb_001279_230 Hb_000796_060--Hb_001279_230 Hb_000398_130 Hb_000398_130 Hb_000796_060--Hb_000398_130 Hb_023528_010--Hb_092043_020 Hb_023528_010--Hb_003793_050 Hb_023528_010--Hb_007943_010 Hb_023528_010--Hb_125948_020 Hb_023528_010--Hb_001104_040 Hb_048207_010--Hb_001104_040 Hb_048207_010--Hb_001279_230 Hb_006634_010 Hb_006634_010 Hb_048207_010--Hb_006634_010 Hb_009189_060 Hb_009189_060 Hb_048207_010--Hb_009189_060 Hb_048207_010--Hb_005730_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0647333 0.177416 0.0985427 0.0131694 0.486931 0.02842
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis