Hb_004899_180

Information

Type -
Description -
Location Contig4899: 162718-166039
Sequence    

Annotation

kegg
ID pop:POPTR_0006s13990g
description flavin-containing monooxygenase family protein
nr
ID KDP33960.1
description hypothetical protein JCGZ_07531 [Jatropha curcas]
swissprot
ID Q9LMA1
description Probable flavin-containing monooxygenase 1 OS=Arabidopsis thaliana GN=FMO1 PE=2 SV=1
trembl
ID A0A067KNU1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_07531 PE=4 SV=1
Gene Ontology
ID GO:0004499
description probable flavin-containing monooxygenase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 013_O08r.ab1: 165556-168188

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004899_180 0.0 - - hypothetical protein JCGZ_07531 [Jatropha curcas]
2 Hb_001899_030 0.1573881123 - - hypothetical protein JCGZ_19903 [Jatropha curcas]
3 Hb_062226_030 0.1662568637 - - -
4 Hb_001606_020 0.2081507562 - - PREDICTED: cell number regulator 2-like [Malus domestica]
5 Hb_000023_270 0.227122575 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000175_640 0.229262692 - - PREDICTED: photosynthetic NDH subunit of subcomplex B 3, chloroplastic [Jatropha curcas]
7 Hb_000186_110 0.2305428598 - - hypothetical protein CISIN_1g020639mg [Citrus sinensis]
8 Hb_005976_070 0.2321262318 - - triacylglycerol lipase, putative [Ricinus communis]
9 Hb_071126_010 0.2332855613 - - BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative [Ricinus communis]
10 Hb_000062_480 0.2490508833 - - PREDICTED: 4-coumarate--CoA ligase-like 9 isoform X1 [Jatropha curcas]
11 Hb_000768_120 0.2595270664 - - PREDICTED: RNA polymerase sigma factor sigB [Jatropha curcas]
12 Hb_006487_040 0.2598773124 - - PREDICTED: putative ribonuclease H protein At1g65750 [Prunus mume]
13 Hb_004208_090 0.2636583043 - - RNA polymerase sigma factor rpoD, putative [Ricinus communis]
14 Hb_000603_270 0.2657726983 - - PREDICTED: uncharacterized protein LOC105638080 [Jatropha curcas]
15 Hb_002006_010 0.2671916877 - - Adenine nucleotide alpha hydrolases-like superfamily protein, putative isoform 1 [Theobroma cacao]
16 Hb_011649_010 0.2682356332 transcription factor TF Family: Pseudo ARR-B sensory transduction histidine kinase, putative [Ricinus communis]
17 Hb_000118_090 0.268518434 - - Glutamyl-tRNA reductase 1, chloroplast precursor, putative [Ricinus communis]
18 Hb_003786_080 0.2695142465 - - electron transporter, putative [Ricinus communis]
19 Hb_002400_010 0.2695813528 - - PREDICTED: putative L-ascorbate peroxidase 6 [Jatropha curcas]
20 Hb_003862_040 0.2725373355 - - Plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_004899_180 Hb_004899_180 Hb_001899_030 Hb_001899_030 Hb_004899_180--Hb_001899_030 Hb_062226_030 Hb_062226_030 Hb_004899_180--Hb_062226_030 Hb_001606_020 Hb_001606_020 Hb_004899_180--Hb_001606_020 Hb_000023_270 Hb_000023_270 Hb_004899_180--Hb_000023_270 Hb_000175_640 Hb_000175_640 Hb_004899_180--Hb_000175_640 Hb_000186_110 Hb_000186_110 Hb_004899_180--Hb_000186_110 Hb_001899_030--Hb_062226_030 Hb_001899_030--Hb_001606_020 Hb_001899_030--Hb_000023_270 Hb_001221_200 Hb_001221_200 Hb_001899_030--Hb_001221_200 Hb_001221_190 Hb_001221_190 Hb_001899_030--Hb_001221_190 Hb_062226_030--Hb_001606_020 Hb_062226_030--Hb_000186_110 Hb_062226_030--Hb_000023_270 Hb_062226_030--Hb_000175_640 Hb_001606_020--Hb_000186_110 Hb_001606_020--Hb_000175_640 Hb_000317_450 Hb_000317_450 Hb_001606_020--Hb_000317_450 Hb_022149_020 Hb_022149_020 Hb_000023_270--Hb_022149_020 Hb_000023_270--Hb_001221_190 Hb_005976_070 Hb_005976_070 Hb_000023_270--Hb_005976_070 Hb_001252_030 Hb_001252_030 Hb_000023_270--Hb_001252_030 Hb_000347_190 Hb_000347_190 Hb_000023_270--Hb_000347_190 Hb_071079_020 Hb_071079_020 Hb_000023_270--Hb_071079_020 Hb_000130_330 Hb_000130_330 Hb_000175_640--Hb_000130_330 Hb_000768_120 Hb_000768_120 Hb_000175_640--Hb_000768_120 Hb_000062_480 Hb_000062_480 Hb_000175_640--Hb_000062_480 Hb_000175_640--Hb_000186_110 Hb_002495_090 Hb_002495_090 Hb_000175_640--Hb_002495_090 Hb_002249_090 Hb_002249_090 Hb_000175_640--Hb_002249_090 Hb_000118_090 Hb_000118_090 Hb_000186_110--Hb_000118_090 Hb_000186_110--Hb_000062_480 Hb_071126_010 Hb_071126_010 Hb_000186_110--Hb_071126_010 Hb_000186_110--Hb_000130_330 Hb_004611_040 Hb_004611_040 Hb_000186_110--Hb_004611_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0582215 0.895946 0.290037 0.381905 0.172658
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0473176 0 0.948317

CAGE analysis