Hb_004197_020

Information

Type -
Description -
Location Contig4197: 28672-41973
Sequence    

Annotation

kegg
ID rcu:RCOM_1026270
description Anthocyanin 5-aromatic acyltransferase, putative (EC:2.3.1.153)
nr
ID XP_002527623.1
description Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
swissprot
ID Q940Z5
description Phenolic glucoside malonyltransferase 1 OS=Arabidopsis thaliana GN=PMAT1 PE=1 SV=1
trembl
ID B9SNQ4
description Anthocyanin 5-aromatic acyltransferase, putative OS=Ricinus communis GN=RCOM_1026270 PE=4 SV=1
Gene Ontology
ID GO:0016747
description phenolic glucoside malonyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004197_020 0.0 - - Anthocyanin 5-aromatic acyltransferase, putative [Ricinus communis]
2 Hb_004592_030 0.0326577915 - - unknown [Lotus japonicus]
3 Hb_004631_040 0.0716652486 - - hypothetical protein CARUB_v10021660mg, partial [Capsella rubella]
4 Hb_000176_040 0.0846799814 transcription factor TF Family: SET PREDICTED: histone-lysine N-methyltransferase ASHR3 isoform X2 [Jatropha curcas]
5 Hb_000030_080 0.0863749055 - - PREDICTED: uncharacterized protein LOC105632640 [Jatropha curcas]
6 Hb_003902_070 0.093353198 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000480_060 0.096894451 - - PREDICTED: kinesin-like protein NACK1 [Jatropha curcas]
8 Hb_000085_360 0.1004335911 - - PREDICTED: kinesin-like protein KIN12B [Jatropha curcas]
9 Hb_001076_010 0.1023064946 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
10 Hb_001279_110 0.103033614 - - PREDICTED: uncharacterized protein LOC105633338 isoform X4 [Jatropha curcas]
11 Hb_119044_040 0.1068058585 - - cyclin B, putative [Ricinus communis]
12 Hb_006588_100 0.1077441472 - - conserved hypothetical protein [Ricinus communis]
13 Hb_000060_030 0.1089687495 - - PREDICTED: carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like [Jatropha curcas]
14 Hb_005276_090 0.1133988147 - - PREDICTED: uncharacterized protein LOC105649997 isoform X2 [Jatropha curcas]
15 Hb_001454_270 0.1152628463 - - PREDICTED: condensin-2 complex subunit D3 isoform X2 [Jatropha curcas]
16 Hb_000116_050 0.1161298343 - - PREDICTED: G2/mitotic-specific cyclin-2-like isoform X2 [Jatropha curcas]
17 Hb_003368_070 0.1171631068 - - PREDICTED: uncharacterized protein LOC105109387 [Populus euphratica]
18 Hb_007044_260 0.120935596 - - PREDICTED: uncharacterized protein LOC105638706 isoform X1 [Jatropha curcas]
19 Hb_181744_010 0.1233837116 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
20 Hb_002874_010 0.1245604713 - - PREDICTED: replication protein A 32 kDa subunit A isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004197_020 Hb_004197_020 Hb_004592_030 Hb_004592_030 Hb_004197_020--Hb_004592_030 Hb_004631_040 Hb_004631_040 Hb_004197_020--Hb_004631_040 Hb_000176_040 Hb_000176_040 Hb_004197_020--Hb_000176_040 Hb_000030_080 Hb_000030_080 Hb_004197_020--Hb_000030_080 Hb_003902_070 Hb_003902_070 Hb_004197_020--Hb_003902_070 Hb_000480_060 Hb_000480_060 Hb_004197_020--Hb_000480_060 Hb_004592_030--Hb_004631_040 Hb_004592_030--Hb_003902_070 Hb_004592_030--Hb_000030_080 Hb_004592_030--Hb_000480_060 Hb_000085_360 Hb_000085_360 Hb_004592_030--Hb_000085_360 Hb_119044_040 Hb_119044_040 Hb_004631_040--Hb_119044_040 Hb_004631_040--Hb_000085_360 Hb_001279_110 Hb_001279_110 Hb_004631_040--Hb_001279_110 Hb_002874_010 Hb_002874_010 Hb_004631_040--Hb_002874_010 Hb_003368_070 Hb_003368_070 Hb_000176_040--Hb_003368_070 Hb_000176_040--Hb_004631_040 Hb_000176_040--Hb_004592_030 Hb_074674_010 Hb_074674_010 Hb_000176_040--Hb_074674_010 Hb_001384_030 Hb_001384_030 Hb_000176_040--Hb_001384_030 Hb_000030_080--Hb_003902_070 Hb_001263_030 Hb_001263_030 Hb_000030_080--Hb_001263_030 Hb_001454_270 Hb_001454_270 Hb_000030_080--Hb_001454_270 Hb_001076_010 Hb_001076_010 Hb_000030_080--Hb_001076_010 Hb_000261_550 Hb_000261_550 Hb_003902_070--Hb_000261_550 Hb_000077_300 Hb_000077_300 Hb_003902_070--Hb_000077_300 Hb_003902_070--Hb_001454_270 Hb_002757_010 Hb_002757_010 Hb_003902_070--Hb_002757_010 Hb_001307_150 Hb_001307_150 Hb_000480_060--Hb_001307_150 Hb_009113_060 Hb_009113_060 Hb_000480_060--Hb_009113_060 Hb_001699_270 Hb_001699_270 Hb_000480_060--Hb_001699_270 Hb_006588_100 Hb_006588_100 Hb_000480_060--Hb_006588_100 Hb_000345_450 Hb_000345_450 Hb_000480_060--Hb_000345_450 Hb_000480_060--Hb_000085_360
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.720737 0.355513 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.118956 0.0394216

CAGE analysis