Hb_004128_210

Information

Type -
Description -
Location Contig4128: 154775-157255
Sequence    

Annotation

kegg
ID rcu:RCOM_0820260
description hypothetical protein
nr
ID XP_012082231.1
description PREDICTED: protein ALUMINUM SENSITIVE 3 [Jatropha curcas]
swissprot
ID Q9ZUT3
description Protein ALUMINUM SENSITIVE 3 OS=Arabidopsis thaliana GN=ALS3 PE=1 SV=1
trembl
ID A0A067JYJ5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16430 PE=4 SV=1
Gene Ontology
ID GO:0010044
description protein aluminum sensitive 3

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_40881: 155175-157276
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004128_210 0.0 - - PREDICTED: protein ALUMINUM SENSITIVE 3 [Jatropha curcas]
2 Hb_081245_010 0.1203789208 - - Caffeic acid 3-O-methyltransferase [Morus notabilis]
3 Hb_004650_070 0.1695693135 - - -
4 Hb_000733_030 0.1849579768 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
5 Hb_000809_050 0.1918204464 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639663 isoform X2 [Jatropha curcas]
6 Hb_001198_030 0.1974145378 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
7 Hb_005348_080 0.2074274157 - - PREDICTED: oligouridylate-binding protein 1-like [Jatropha curcas]
8 Hb_001266_050 0.208644714 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X2 [Elaeis guineensis]
9 Hb_031527_050 0.2102154119 - - PREDICTED: universal stress protein A-like protein [Populus euphratica]
10 Hb_001349_010 0.2115672631 - - -
11 Hb_001584_300 0.2128866627 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
12 Hb_005298_030 0.2148909278 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
13 Hb_010344_040 0.2151296497 - - PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]
14 Hb_000008_250 0.2200910971 - - conserved hypothetical protein [Ricinus communis]
15 Hb_005955_020 0.2203193327 - - ring finger containing protein, putative [Ricinus communis]
16 Hb_000614_070 0.2208497807 - - -
17 Hb_000723_310 0.2238539368 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
18 Hb_010362_020 0.2241545897 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 38-like [Jatropha curcas]
19 Hb_001220_040 0.2244145687 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
20 Hb_004410_010 0.2280691787 - - PREDICTED: probable 1-acylglycerol-3-phosphate O-acyltransferase [Jatropha curcas]

Gene co-expression network

sample Hb_004128_210 Hb_004128_210 Hb_081245_010 Hb_081245_010 Hb_004128_210--Hb_081245_010 Hb_004650_070 Hb_004650_070 Hb_004128_210--Hb_004650_070 Hb_000733_030 Hb_000733_030 Hb_004128_210--Hb_000733_030 Hb_000809_050 Hb_000809_050 Hb_004128_210--Hb_000809_050 Hb_001198_030 Hb_001198_030 Hb_004128_210--Hb_001198_030 Hb_005348_080 Hb_005348_080 Hb_004128_210--Hb_005348_080 Hb_081245_010--Hb_001198_030 Hb_001266_050 Hb_001266_050 Hb_081245_010--Hb_001266_050 Hb_001349_010 Hb_001349_010 Hb_081245_010--Hb_001349_010 Hb_000300_400 Hb_000300_400 Hb_081245_010--Hb_000300_400 Hb_081245_010--Hb_000733_030 Hb_004650_070--Hb_000809_050 Hb_000085_310 Hb_000085_310 Hb_004650_070--Hb_000085_310 Hb_004650_070--Hb_000733_030 Hb_005955_020 Hb_005955_020 Hb_004650_070--Hb_005955_020 Hb_002662_100 Hb_002662_100 Hb_004650_070--Hb_002662_100 Hb_028872_050 Hb_028872_050 Hb_004650_070--Hb_028872_050 Hb_000733_030--Hb_001349_010 Hb_025087_010 Hb_025087_010 Hb_000733_030--Hb_025087_010 Hb_005000_290 Hb_005000_290 Hb_000733_030--Hb_005000_290 Hb_000733_030--Hb_000809_050 Hb_002897_060 Hb_002897_060 Hb_000733_030--Hb_002897_060 Hb_000304_020 Hb_000304_020 Hb_000809_050--Hb_000304_020 Hb_000072_280 Hb_000072_280 Hb_000809_050--Hb_000072_280 Hb_001366_220 Hb_001366_220 Hb_000809_050--Hb_001366_220 Hb_030982_040 Hb_030982_040 Hb_000809_050--Hb_030982_040 Hb_000809_050--Hb_000085_310 Hb_001198_030--Hb_001349_010 Hb_004297_040 Hb_004297_040 Hb_001198_030--Hb_004297_040 Hb_001198_030--Hb_001266_050 Hb_010166_020 Hb_010166_020 Hb_001198_030--Hb_010166_020 Hb_000143_050 Hb_000143_050 Hb_001198_030--Hb_000143_050 Hb_001621_180 Hb_001621_180 Hb_001198_030--Hb_001621_180 Hb_000831_060 Hb_000831_060 Hb_005348_080--Hb_000831_060 Hb_008016_010 Hb_008016_010 Hb_005348_080--Hb_008016_010 Hb_000291_200 Hb_000291_200 Hb_005348_080--Hb_000291_200 Hb_073973_110 Hb_073973_110 Hb_005348_080--Hb_073973_110 Hb_001804_040 Hb_001804_040 Hb_005348_080--Hb_001804_040 Hb_098709_010 Hb_098709_010 Hb_005348_080--Hb_098709_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.63871 1.84149 0.440668 5.57263 41.1526 14.0431
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
50.588 32.9436 26.0932 4.36404 0.774172

CAGE analysis