Hb_081245_010

Information

Type -
Description -
Location Contig81245: 3-311
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa007511mg
description hypothetical protein
nr
ID XP_010103059.1
description Caffeic acid 3-O-methyltransferase [Morus notabilis]
swissprot
ID Q8GU25
description Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1
trembl
ID W9RKB7
description Caffeic acid 3-O-methyltransferase OS=Morus notabilis GN=L484_002595 PE=4 SV=1
Gene Ontology
ID GO:0005634
description caffeic acid 3-o-methyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_081245_010 0.0 - - Caffeic acid 3-O-methyltransferase [Morus notabilis]
2 Hb_004128_210 0.1203789208 - - PREDICTED: protein ALUMINUM SENSITIVE 3 [Jatropha curcas]
3 Hb_001198_030 0.1285787529 - - hypothetical protein POPTR_0003s01110g [Populus trichocarpa]
4 Hb_001266_050 0.1449559574 - - PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like isoform X2 [Elaeis guineensis]
5 Hb_001349_010 0.1585705887 - - -
6 Hb_000300_400 0.1673080368 - - hypothetical protein PHAVU_001G114100g [Phaseolus vulgaris]
7 Hb_000733_030 0.1723684637 - - PREDICTED: 18.1 kDa class I heat shock protein-like [Populus euphratica]
8 Hb_000809_050 0.1800151405 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639663 isoform X2 [Jatropha curcas]
9 Hb_010166_020 0.1827347386 transcription factor TF Family: NF-YC ccaat-binding transcription factor, putative [Ricinus communis]
10 Hb_001584_300 0.1836574442 - - PREDICTED: pyroglutamyl-peptidase 1-like protein [Jatropha curcas]
11 Hb_000085_250 0.1873167307 - - sodium/hydrogen exchanger, putative [Ricinus communis]
12 Hb_000563_560 0.187472644 - - PREDICTED: bidirectional sugar transporter SWEET17 [Jatropha curcas]
13 Hb_098315_030 0.1889342109 - - PREDICTED: putative glutamine amidotransferase YLR126C [Jatropha curcas]
14 Hb_010344_040 0.1898338673 - - PREDICTED: uncharacterized protein LOC105636452 [Jatropha curcas]
15 Hb_004297_040 0.1916924655 - - acyl CoA reductase [Hevea brasiliensis]
16 Hb_006132_060 0.1919721968 - - phospholipid/glycerol acyltransferase family protein [Populus trichocarpa]
17 Hb_005298_030 0.1929634718 - - hypothetical protein JCGZ_18389 [Jatropha curcas]
18 Hb_000603_210 0.1945068525 - - hypothetical protein POPTR_0006s23660g [Populus trichocarpa]
19 Hb_024505_040 0.1960109424 - - homogentisate geranylgeranyl transferase [Hevea brasiliensis]
20 Hb_000614_070 0.1962775777 - - -

Gene co-expression network

sample Hb_081245_010 Hb_081245_010 Hb_004128_210 Hb_004128_210 Hb_081245_010--Hb_004128_210 Hb_001198_030 Hb_001198_030 Hb_081245_010--Hb_001198_030 Hb_001266_050 Hb_001266_050 Hb_081245_010--Hb_001266_050 Hb_001349_010 Hb_001349_010 Hb_081245_010--Hb_001349_010 Hb_000300_400 Hb_000300_400 Hb_081245_010--Hb_000300_400 Hb_000733_030 Hb_000733_030 Hb_081245_010--Hb_000733_030 Hb_004650_070 Hb_004650_070 Hb_004128_210--Hb_004650_070 Hb_004128_210--Hb_000733_030 Hb_000809_050 Hb_000809_050 Hb_004128_210--Hb_000809_050 Hb_004128_210--Hb_001198_030 Hb_005348_080 Hb_005348_080 Hb_004128_210--Hb_005348_080 Hb_001198_030--Hb_001349_010 Hb_004297_040 Hb_004297_040 Hb_001198_030--Hb_004297_040 Hb_001198_030--Hb_001266_050 Hb_010166_020 Hb_010166_020 Hb_001198_030--Hb_010166_020 Hb_000143_050 Hb_000143_050 Hb_001198_030--Hb_000143_050 Hb_001621_180 Hb_001621_180 Hb_001198_030--Hb_001621_180 Hb_000526_020 Hb_000526_020 Hb_001266_050--Hb_000526_020 Hb_001266_050--Hb_010166_020 Hb_000052_010 Hb_000052_010 Hb_001266_050--Hb_000052_010 Hb_004410_010 Hb_004410_010 Hb_001266_050--Hb_004410_010 Hb_000184_180 Hb_000184_180 Hb_001266_050--Hb_000184_180 Hb_000934_030 Hb_000934_030 Hb_001349_010--Hb_000934_030 Hb_001349_010--Hb_000733_030 Hb_042729_010 Hb_042729_010 Hb_001349_010--Hb_042729_010 Hb_025087_010 Hb_025087_010 Hb_001349_010--Hb_025087_010 Hb_001722_040 Hb_001722_040 Hb_001349_010--Hb_001722_040 Hb_000603_210 Hb_000603_210 Hb_000300_400--Hb_000603_210 Hb_005539_210 Hb_005539_210 Hb_000300_400--Hb_005539_210 Hb_149683_010 Hb_149683_010 Hb_000300_400--Hb_149683_010 Hb_006816_440 Hb_006816_440 Hb_000300_400--Hb_006816_440 Hb_002235_230 Hb_002235_230 Hb_000300_400--Hb_002235_230 Hb_001723_080 Hb_001723_080 Hb_000300_400--Hb_001723_080 Hb_000733_030--Hb_004650_070 Hb_000733_030--Hb_025087_010 Hb_005000_290 Hb_005000_290 Hb_000733_030--Hb_005000_290 Hb_000733_030--Hb_000809_050 Hb_002897_060 Hb_002897_060 Hb_000733_030--Hb_002897_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
14.6586 0.932191 0.62768 6.24315 53.7264 19.5018
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
101.216 66.2599 54.1553 6.1954 0

CAGE analysis