Hb_003086_120

Information

Type -
Description -
Location Contig3086: 80036-80682
Sequence    

Annotation

kegg
ID gmx:102665485
description uncharacterized LOC102665485
nr
ID XP_012065671.1
description PREDICTED: uncharacterized protein LOC105628509 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID Q2HSK6
description Putative uncharacterized protein OS=Medicago truncatula GN=MtrDRAFT_AC151521g37v2 PE=4 SV=2
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003086_120 0.0 - - PREDICTED: uncharacterized protein LOC105628509 [Jatropha curcas]
2 Hb_001969_010 0.1755103858 - - PREDICTED: probable protein Pop3 [Nelumbo nucifera]
3 Hb_007747_190 0.1920648894 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003602_050 0.2377000501 - - zinc binding dehydrogenase, putative [Ricinus communis]
5 Hb_000449_040 0.2467090116 - - protein with unknown function [Ricinus communis]
6 Hb_000227_130 0.2504565264 - - PREDICTED: peroxiredoxin-2F, mitochondrial [Jatropha curcas]
7 Hb_000096_060 0.2549683597 - - conserved hypothetical protein [Ricinus communis]
8 Hb_021888_060 0.2550238663 - - PREDICTED: zinc finger CCCH domain-containing protein 15 homolog [Jatropha curcas]
9 Hb_000563_270 0.2631064343 - - -
10 Hb_001950_120 0.2684563568 - - PREDICTED: probable cadmium/zinc-transporting ATPase HMA1, chloroplastic [Jatropha curcas]
11 Hb_000703_260 0.277356856 - - N-acetylglucosamine kinase, putative [Ricinus communis]
12 Hb_150379_010 0.2778769864 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647563 [Jatropha curcas]
13 Hb_001481_180 0.2797684012 - - plasma membrane H+-ATPase [Hevea brasiliensis]
14 Hb_001769_100 0.2808632011 - - hypothetical protein POPTR_0014s01620g [Populus trichocarpa]
15 Hb_116349_170 0.2843433343 - - PREDICTED: uncharacterized protein LOC105649815 [Jatropha curcas]
16 Hb_015978_070 0.2846925148 - - -
17 Hb_003081_030 0.2855200105 - - PREDICTED: uncharacterized protein LOC101256381 [Solanum lycopersicum]
18 Hb_000645_190 0.2883434801 - - PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
19 Hb_000847_140 0.2919631333 - - -
20 Hb_000039_170 0.2924605185 - - protein MOTHER of FT and TF 1-like [Jatropha curcas]

Gene co-expression network

sample Hb_003086_120 Hb_003086_120 Hb_001969_010 Hb_001969_010 Hb_003086_120--Hb_001969_010 Hb_007747_190 Hb_007747_190 Hb_003086_120--Hb_007747_190 Hb_003602_050 Hb_003602_050 Hb_003086_120--Hb_003602_050 Hb_000449_040 Hb_000449_040 Hb_003086_120--Hb_000449_040 Hb_000227_130 Hb_000227_130 Hb_003086_120--Hb_000227_130 Hb_000096_060 Hb_000096_060 Hb_003086_120--Hb_000096_060 Hb_001969_010--Hb_000449_040 Hb_000684_160 Hb_000684_160 Hb_001969_010--Hb_000684_160 Hb_000454_110 Hb_000454_110 Hb_001969_010--Hb_000454_110 Hb_150299_030 Hb_150299_030 Hb_001969_010--Hb_150299_030 Hb_025964_030 Hb_025964_030 Hb_001969_010--Hb_025964_030 Hb_007747_190--Hb_003602_050 Hb_000703_260 Hb_000703_260 Hb_007747_190--Hb_000703_260 Hb_007747_190--Hb_000227_130 Hb_150379_010 Hb_150379_010 Hb_007747_190--Hb_150379_010 Hb_075136_010 Hb_075136_010 Hb_007747_190--Hb_075136_010 Hb_000847_140 Hb_000847_140 Hb_003602_050--Hb_000847_140 Hb_000563_270 Hb_000563_270 Hb_003602_050--Hb_000563_270 Hb_012305_120 Hb_012305_120 Hb_003602_050--Hb_012305_120 Hb_007532_040 Hb_007532_040 Hb_003602_050--Hb_007532_040 Hb_116349_170 Hb_116349_170 Hb_000449_040--Hb_116349_170 Hb_002781_020 Hb_002781_020 Hb_000449_040--Hb_002781_020 Hb_000487_320 Hb_000487_320 Hb_000449_040--Hb_000487_320 Hb_000645_190 Hb_000645_190 Hb_000449_040--Hb_000645_190 Hb_143629_230 Hb_143629_230 Hb_000449_040--Hb_143629_230 Hb_000134_020 Hb_000134_020 Hb_000449_040--Hb_000134_020 Hb_001950_120 Hb_001950_120 Hb_000227_130--Hb_001950_120 Hb_000227_130--Hb_116349_170 Hb_003680_070 Hb_003680_070 Hb_000227_130--Hb_003680_070 Hb_000227_130--Hb_000487_320 Hb_000227_130--Hb_000449_040 Hb_003226_160 Hb_003226_160 Hb_000227_130--Hb_003226_160 Hb_011310_060 Hb_011310_060 Hb_000096_060--Hb_011310_060 Hb_003549_020 Hb_003549_020 Hb_000096_060--Hb_003549_020 Hb_000096_060--Hb_000645_190 Hb_000364_210 Hb_000364_210 Hb_000096_060--Hb_000364_210 Hb_000184_220 Hb_000184_220 Hb_000096_060--Hb_000184_220 Hb_001769_100 Hb_001769_100 Hb_000096_060--Hb_001769_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.315086 0 0 0 0 1.31944
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.748587 1.76898 0.419256 0.273688 0.455233

CAGE analysis