Hb_002805_140

Information

Type -
Description -
Location Contig2805: 121535-121812
Sequence    

Annotation

kegg
ID pop:POPTR_0001s28390g
description POPTRDRAFT_64647; hypothetical protein
nr
ID XP_002298479.1
description hypothetical protein POPTR_0001s28390g [Populus trichocarpa]
swissprot
ID O81117
description Cytochrome P450 94A1 OS=Vicia sativa GN=CYP94A1 PE=2 SV=2
trembl
ID B9GG98
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0001s28390g PE=3 SV=1
Gene Ontology
ID GO:0004497
description cytochrome p450 94a1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002805_140 0.0 - - hypothetical protein POPTR_0001s28390g [Populus trichocarpa]
2 Hb_003391_050 0.2203915483 - - -
3 Hb_007904_190 0.3030287461 - - -
4 Hb_001673_030 0.3167171251 - - hypothetical protein JCGZ_08729 [Jatropha curcas]
5 Hb_164225_010 0.3378925839 - - -
6 Hb_004534_020 0.341327922 - - PREDICTED: cysteine proteinase inhibitor B [Jatropha curcas]
7 Hb_006698_050 0.344745179 - - Beta-glucosidase, putative [Ricinus communis]
8 Hb_012188_010 0.3458497343 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
9 Hb_000071_200 0.3466735015 - - PREDICTED: uncharacterized protein LOC105764710 isoform X3 [Gossypium raimondii]
10 Hb_002307_070 0.3479016903 - - hypothetical protein JCGZ_14841 [Jatropha curcas]
11 Hb_001217_060 0.3484086542 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
12 Hb_032076_010 0.353103029 - - -
13 Hb_007508_040 0.3537474328 - - PREDICTED: ATP synthase subunit gamma, mitochondrial [Jatropha curcas]
14 Hb_000521_110 0.367340742 - - conserved hypothetical protein [Ricinus communis]
15 Hb_007778_020 0.3715834039 - - -
16 Hb_000025_060 0.3744656096 - - unknown [Populus trichocarpa]
17 Hb_003297_010 0.378736776 - - PREDICTED: uncharacterized protein LOC105636715 [Jatropha curcas]
18 Hb_000217_050 0.3792299341 - - elongation factor 1-alpha, putative [Ricinus communis]
19 Hb_020549_010 0.3805411824 - - PREDICTED: uncharacterized protein LOC105638664 isoform X2 [Jatropha curcas]
20 Hb_001396_170 0.380964574 - - unnamed protein product [Vitis vinifera]

Gene co-expression network

sample Hb_002805_140 Hb_002805_140 Hb_003391_050 Hb_003391_050 Hb_002805_140--Hb_003391_050 Hb_007904_190 Hb_007904_190 Hb_002805_140--Hb_007904_190 Hb_001673_030 Hb_001673_030 Hb_002805_140--Hb_001673_030 Hb_164225_010 Hb_164225_010 Hb_002805_140--Hb_164225_010 Hb_004534_020 Hb_004534_020 Hb_002805_140--Hb_004534_020 Hb_006698_050 Hb_006698_050 Hb_002805_140--Hb_006698_050 Hb_003391_050--Hb_164225_010 Hb_023647_040 Hb_023647_040 Hb_003391_050--Hb_023647_040 Hb_000334_200 Hb_000334_200 Hb_003391_050--Hb_000334_200 Hb_036693_010 Hb_036693_010 Hb_003391_050--Hb_036693_010 Hb_001396_170 Hb_001396_170 Hb_003391_050--Hb_001396_170 Hb_000014_130 Hb_000014_130 Hb_007904_190--Hb_000014_130 Hb_002837_090 Hb_002837_090 Hb_007904_190--Hb_002837_090 Hb_007904_190--Hb_004534_020 Hb_165078_010 Hb_165078_010 Hb_007904_190--Hb_165078_010 Hb_003609_010 Hb_003609_010 Hb_007904_190--Hb_003609_010 Hb_024828_040 Hb_024828_040 Hb_007904_190--Hb_024828_040 Hb_020549_010 Hb_020549_010 Hb_001673_030--Hb_020549_010 Hb_001676_030 Hb_001676_030 Hb_001673_030--Hb_001676_030 Hb_000071_200 Hb_000071_200 Hb_001673_030--Hb_000071_200 Hb_000270_860 Hb_000270_860 Hb_001673_030--Hb_000270_860 Hb_005539_300 Hb_005539_300 Hb_001673_030--Hb_005539_300 Hb_000792_080 Hb_000792_080 Hb_001673_030--Hb_000792_080 Hb_049884_010 Hb_049884_010 Hb_164225_010--Hb_049884_010 Hb_055339_010 Hb_055339_010 Hb_164225_010--Hb_055339_010 Hb_003772_020 Hb_003772_020 Hb_164225_010--Hb_003772_020 Hb_002737_020 Hb_002737_020 Hb_164225_010--Hb_002737_020 Hb_164225_010--Hb_036693_010 Hb_003859_010 Hb_003859_010 Hb_004534_020--Hb_003859_010 Hb_137543_010 Hb_137543_010 Hb_004534_020--Hb_137543_010 Hb_007382_040 Hb_007382_040 Hb_004534_020--Hb_007382_040 Hb_001565_100 Hb_001565_100 Hb_004534_020--Hb_001565_100 Hb_002609_100 Hb_002609_100 Hb_004534_020--Hb_002609_100 Hb_166786_030 Hb_166786_030 Hb_004534_020--Hb_166786_030 Hb_000347_500 Hb_000347_500 Hb_006698_050--Hb_000347_500 Hb_098546_010 Hb_098546_010 Hb_006698_050--Hb_098546_010 Hb_087762_010 Hb_087762_010 Hb_006698_050--Hb_087762_010 Hb_000243_280 Hb_000243_280 Hb_006698_050--Hb_000243_280 Hb_000078_180 Hb_000078_180 Hb_006698_050--Hb_000078_180 Hb_000326_030 Hb_000326_030 Hb_006698_050--Hb_000326_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.34674 0.506531 0.255943 0 0 0.747279
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.449778 0 0 0

CAGE analysis