Hb_002367_120

Information

Type -
Description -
Location Contig2367: 132130-136980
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002367_120 0.0 - - -
2 Hb_000407_060 0.1265151956 - - -
3 Hb_172632_020 0.1395239696 - - -
4 Hb_000175_550 0.2258659987 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
5 Hb_057217_010 0.230032696 - - PREDICTED: uncharacterized protein LOC104594412 [Nelumbo nucifera]
6 Hb_147996_010 0.2512429983 - - PREDICTED: mitochondrial Rho GTPase 2 isoform X1 [Jatropha curcas]
7 Hb_029393_020 0.2626740898 transcription factor TF Family: Orphans PREDICTED: zinc finger protein CONSTANS-LIKE 12-like [Jatropha curcas]
8 Hb_004361_030 0.2800029284 - - PREDICTED: uncharacterized protein LOC104239397 isoform X1 [Nicotiana sylvestris]
9 Hb_012052_030 0.2800085066 - - -
10 Hb_001218_080 0.2977164437 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
11 Hb_027337_070 0.2977590756 - - hypothetical protein POPTR_0001s29030g [Populus trichocarpa]
12 Hb_000248_120 0.2987555248 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
13 Hb_003238_010 0.3061190427 - - PREDICTED: uncharacterized protein LOC104880636 [Vitis vinifera]
14 Hb_088176_010 0.3108770202 - - -
15 Hb_000270_850 0.3130283224 - - conserved hypothetical protein [Ricinus communis]
16 Hb_011861_110 0.3135549163 - - PREDICTED: uncharacterized protein LOC105636580 [Jatropha curcas]
17 Hb_002003_110 0.3138895893 - - PREDICTED: uncharacterized protein LOC105634406 [Jatropha curcas]
18 Hb_005214_020 0.3153930773 - - hypothetical protein JCGZ_12886 [Jatropha curcas]
19 Hb_150998_010 0.3160963347 - - PREDICTED: uncharacterized protein LOC105631130 [Jatropha curcas]
20 Hb_006216_010 0.3165474858 - - PREDICTED: uncharacterized protein LOC103411650 [Malus domestica]

Gene co-expression network

sample Hb_002367_120 Hb_002367_120 Hb_000407_060 Hb_000407_060 Hb_002367_120--Hb_000407_060 Hb_172632_020 Hb_172632_020 Hb_002367_120--Hb_172632_020 Hb_000175_550 Hb_000175_550 Hb_002367_120--Hb_000175_550 Hb_057217_010 Hb_057217_010 Hb_002367_120--Hb_057217_010 Hb_147996_010 Hb_147996_010 Hb_002367_120--Hb_147996_010 Hb_029393_020 Hb_029393_020 Hb_002367_120--Hb_029393_020 Hb_000407_060--Hb_172632_020 Hb_027337_070 Hb_027337_070 Hb_000407_060--Hb_027337_070 Hb_004361_030 Hb_004361_030 Hb_000407_060--Hb_004361_030 Hb_000248_120 Hb_000248_120 Hb_000407_060--Hb_000248_120 Hb_000407_060--Hb_057217_010 Hb_172632_020--Hb_057217_010 Hb_172632_020--Hb_004361_030 Hb_001218_080 Hb_001218_080 Hb_172632_020--Hb_001218_080 Hb_150998_010 Hb_150998_010 Hb_172632_020--Hb_150998_010 Hb_176121_010 Hb_176121_010 Hb_000175_550--Hb_176121_010 Hb_003658_030 Hb_003658_030 Hb_000175_550--Hb_003658_030 Hb_000701_070 Hb_000701_070 Hb_000175_550--Hb_000701_070 Hb_005214_020 Hb_005214_020 Hb_000175_550--Hb_005214_020 Hb_104498_030 Hb_104498_030 Hb_000175_550--Hb_104498_030 Hb_057217_010--Hb_004361_030 Hb_057217_010--Hb_001218_080 Hb_000270_850 Hb_000270_850 Hb_057217_010--Hb_000270_850 Hb_126907_010 Hb_126907_010 Hb_057217_010--Hb_126907_010 Hb_000610_020 Hb_000610_020 Hb_147996_010--Hb_000610_020 Hb_147996_010--Hb_029393_020 Hb_010921_090 Hb_010921_090 Hb_147996_010--Hb_010921_090 Hb_001486_140 Hb_001486_140 Hb_147996_010--Hb_001486_140 Hb_006615_040 Hb_006615_040 Hb_147996_010--Hb_006615_040 Hb_000589_130 Hb_000589_130 Hb_029393_020--Hb_000589_130 Hb_001251_070 Hb_001251_070 Hb_029393_020--Hb_001251_070 Hb_029393_020--Hb_006615_040 Hb_000566_190 Hb_000566_190 Hb_029393_020--Hb_000566_190 Hb_007253_040 Hb_007253_040 Hb_029393_020--Hb_007253_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0560978 0.0251897 0 0 0.0295531
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0245697 0

CAGE analysis