Hb_002194_070

Information

Type -
Description -
Location Contig2194: 30010-30213
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002194_070 0.0 - - -
2 Hb_041237_010 0.2752418287 - - conserved hypothetical protein [Ricinus communis]
3 Hb_125861_010 0.2753157763 - - hypothetical protein RCOM_0703970 [Ricinus communis]
4 Hb_171619_010 0.277683499 - - protein binding protein, putative [Ricinus communis]
5 Hb_000014_130 0.2814543448 - - PREDICTED: uncharacterized protein LOC104219776 [Nicotiana sylvestris]
6 Hb_001427_180 0.2834382671 - - PREDICTED: F-box/LRR-repeat protein At4g29420 [Jatropha curcas]
7 Hb_000413_170 0.2836829857 - - PREDICTED: probable histone H2A.3 [Jatropha curcas]
8 Hb_019282_010 0.2839469059 - - o-linked n-acetylglucosamine transferase, ogt, putative [Ricinus communis]
9 Hb_000298_080 0.2854381561 - - -
10 Hb_111834_010 0.2864385491 - - PREDICTED: zinc finger CCCH domain-containing protein 48-like [Jatropha curcas]
11 Hb_002249_110 0.2883535966 - - PREDICTED: centromere protein S isoform X1 [Jatropha curcas]
12 Hb_071923_010 0.2884820341 - - -
13 Hb_002904_090 0.2948017464 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like [Vitis vinifera]
14 Hb_003297_020 0.2964383707 - - unknown [Populus trichocarpa x Populus deltoides]
15 Hb_160203_010 0.3022932949 - - -
16 Hb_011794_020 0.3051467626 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
17 Hb_124961_010 0.3118909224 - - hypothetical protein EUGRSUZ_B03893 [Eucalyptus grandis]
18 Hb_130134_030 0.3127241399 transcription factor TF Family: C3H hypothetical protein JCGZ_14472 [Jatropha curcas]
19 Hb_008053_020 0.3156488076 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
20 Hb_002411_130 0.3177567546 - - PREDICTED: cytosolic sulfotransferase 15-like [Populus euphratica]

Gene co-expression network

sample Hb_002194_070 Hb_002194_070 Hb_041237_010 Hb_041237_010 Hb_002194_070--Hb_041237_010 Hb_125861_010 Hb_125861_010 Hb_002194_070--Hb_125861_010 Hb_171619_010 Hb_171619_010 Hb_002194_070--Hb_171619_010 Hb_000014_130 Hb_000014_130 Hb_002194_070--Hb_000014_130 Hb_001427_180 Hb_001427_180 Hb_002194_070--Hb_001427_180 Hb_000413_170 Hb_000413_170 Hb_002194_070--Hb_000413_170 Hb_003398_010 Hb_003398_010 Hb_041237_010--Hb_003398_010 Hb_041237_010--Hb_000014_130 Hb_000617_040 Hb_000617_040 Hb_041237_010--Hb_000617_040 Hb_041237_010--Hb_000413_170 Hb_007978_020 Hb_007978_020 Hb_041237_010--Hb_007978_020 Hb_003299_080 Hb_003299_080 Hb_041237_010--Hb_003299_080 Hb_140595_010 Hb_140595_010 Hb_125861_010--Hb_140595_010 Hb_012867_010 Hb_012867_010 Hb_125861_010--Hb_012867_010 Hb_101020_010 Hb_101020_010 Hb_125861_010--Hb_101020_010 Hb_000580_130 Hb_000580_130 Hb_125861_010--Hb_000580_130 Hb_107847_010 Hb_107847_010 Hb_125861_010--Hb_107847_010 Hb_089889_020 Hb_089889_020 Hb_125861_010--Hb_089889_020 Hb_124961_010 Hb_124961_010 Hb_171619_010--Hb_124961_010 Hb_170532_010 Hb_170532_010 Hb_171619_010--Hb_170532_010 Hb_000160_150 Hb_000160_150 Hb_171619_010--Hb_000160_150 Hb_003297_020 Hb_003297_020 Hb_171619_010--Hb_003297_020 Hb_171619_010--Hb_101020_010 Hb_006230_040 Hb_006230_040 Hb_171619_010--Hb_006230_040 Hb_000014_130--Hb_007978_020 Hb_003772_020 Hb_003772_020 Hb_000014_130--Hb_003772_020 Hb_002904_090 Hb_002904_090 Hb_000014_130--Hb_002904_090 Hb_032018_010 Hb_032018_010 Hb_000014_130--Hb_032018_010 Hb_000014_130--Hb_003398_010 Hb_001513_020 Hb_001513_020 Hb_001427_180--Hb_001513_020 Hb_000352_130 Hb_000352_130 Hb_001427_180--Hb_000352_130 Hb_019282_010 Hb_019282_010 Hb_001427_180--Hb_019282_010 Hb_176117_010 Hb_176117_010 Hb_001427_180--Hb_176117_010 Hb_005016_150 Hb_005016_150 Hb_001427_180--Hb_005016_150 Hb_001427_180--Hb_002904_090 Hb_002609_010 Hb_002609_010 Hb_000413_170--Hb_002609_010 Hb_001907_060 Hb_001907_060 Hb_000413_170--Hb_001907_060 Hb_007348_030 Hb_007348_030 Hb_000413_170--Hb_007348_030 Hb_004225_130 Hb_004225_130 Hb_000413_170--Hb_004225_130 Hb_148209_020 Hb_148209_020 Hb_000413_170--Hb_148209_020 Hb_010883_080 Hb_010883_080 Hb_000413_170--Hb_010883_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.94857 9.31845 6.42333 0 10.8394 33.1755
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.01622 1.08164 0 1.50753 0

CAGE analysis