Hb_125861_010

Information

Type -
Description -
Location Contig125861: 1202-1623
Sequence    

Annotation

kegg
ID rcu:RCOM_0703970
description hypothetical protein
nr
ID XP_002524375.1
description hypothetical protein RCOM_0703970 [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9SEF6
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0703970 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_125861_010 0.0 - - hypothetical protein RCOM_0703970 [Ricinus communis]
2 Hb_140595_010 0.1742208805 - - -
3 Hb_012867_010 0.19609745 - - Vacuolar protein sorting 45 [Theobroma cacao]
4 Hb_101020_010 0.2041138728 - - -
5 Hb_000580_130 0.2142188146 - - hypothetical protein JCGZ_14541 [Jatropha curcas]
6 Hb_107847_010 0.215918517 - - 3-isopropylmalate dehydratase, putative [Ricinus communis]
7 Hb_089889_020 0.2206037157 transcription factor TF Family: B3 PREDICTED: B3 domain-containing protein At2g36080-like [Jatropha curcas]
8 Hb_000413_170 0.2217500838 - - PREDICTED: probable histone H2A.3 [Jatropha curcas]
9 Hb_000808_060 0.223368173 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 16-like [Jatropha curcas]
10 Hb_000544_120 0.2290625839 - - PREDICTED: thymidylate kinase [Jatropha curcas]
11 Hb_035360_010 0.2317747956 - - PREDICTED: putative G3BP-like protein [Jatropha curcas]
12 Hb_000996_180 0.2323703502 - - PREDICTED: tetraspanin-10 [Jatropha curcas]
13 Hb_000619_070 0.2395008337 - - PREDICTED: DNA mismatch repair protein MLH1 [Jatropha curcas]
14 Hb_009693_030 0.2397715153 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
15 Hb_001907_060 0.2405415171 - - PREDICTED: structural maintenance of chromosomes protein 5 [Jatropha curcas]
16 Hb_002904_090 0.2409940972 - - PREDICTED: pentatricopeptide repeat-containing protein At1g71420-like [Vitis vinifera]
17 Hb_003580_040 0.2416676852 - - PREDICTED: protein ENHANCED DOWNY MILDEW 2-like [Jatropha curcas]
18 Hb_045502_010 0.2420599512 - - prefoldin subunit 1 [Jatropha curcas]
19 Hb_006960_030 0.2421031042 transcription factor TF Family: MYB PREDICTED: transcription factor MYB44-like [Jatropha curcas]
20 Hb_179511_010 0.2454147797 - - -

Gene co-expression network

sample Hb_125861_010 Hb_125861_010 Hb_140595_010 Hb_140595_010 Hb_125861_010--Hb_140595_010 Hb_012867_010 Hb_012867_010 Hb_125861_010--Hb_012867_010 Hb_101020_010 Hb_101020_010 Hb_125861_010--Hb_101020_010 Hb_000580_130 Hb_000580_130 Hb_125861_010--Hb_000580_130 Hb_107847_010 Hb_107847_010 Hb_125861_010--Hb_107847_010 Hb_089889_020 Hb_089889_020 Hb_125861_010--Hb_089889_020 Hb_000544_120 Hb_000544_120 Hb_140595_010--Hb_000544_120 Hb_140595_010--Hb_000580_130 Hb_006631_010 Hb_006631_010 Hb_140595_010--Hb_006631_010 Hb_140595_010--Hb_107847_010 Hb_000088_030 Hb_000088_030 Hb_140595_010--Hb_000088_030 Hb_136765_010 Hb_136765_010 Hb_012867_010--Hb_136765_010 Hb_002141_020 Hb_002141_020 Hb_012867_010--Hb_002141_020 Hb_012867_010--Hb_089889_020 Hb_012867_010--Hb_107847_010 Hb_068922_010 Hb_068922_010 Hb_012867_010--Hb_068922_010 Hb_009693_030 Hb_009693_030 Hb_101020_010--Hb_009693_030 Hb_001916_060 Hb_001916_060 Hb_101020_010--Hb_001916_060 Hb_000160_150 Hb_000160_150 Hb_101020_010--Hb_000160_150 Hb_007136_020 Hb_007136_020 Hb_101020_010--Hb_007136_020 Hb_003297_020 Hb_003297_020 Hb_101020_010--Hb_003297_020 Hb_124961_010 Hb_124961_010 Hb_101020_010--Hb_124961_010 Hb_000120_570 Hb_000120_570 Hb_000580_130--Hb_000120_570 Hb_001534_070 Hb_001534_070 Hb_000580_130--Hb_001534_070 Hb_001922_130 Hb_001922_130 Hb_000580_130--Hb_001922_130 Hb_003125_140 Hb_003125_140 Hb_000580_130--Hb_003125_140 Hb_001703_130 Hb_001703_130 Hb_000580_130--Hb_001703_130 Hb_063409_020 Hb_063409_020 Hb_000580_130--Hb_063409_020 Hb_000996_180 Hb_000996_180 Hb_107847_010--Hb_000996_180 Hb_107847_010--Hb_089889_020 Hb_009838_130 Hb_009838_130 Hb_107847_010--Hb_009838_130 Hb_000504_170 Hb_000504_170 Hb_107847_010--Hb_000504_170 Hb_107847_010--Hb_009693_030 Hb_000264_060 Hb_000264_060 Hb_107847_010--Hb_000264_060 Hb_089889_020--Hb_009838_130 Hb_007123_070 Hb_007123_070 Hb_089889_020--Hb_007123_070 Hb_089889_020--Hb_000996_180 Hb_001910_020 Hb_001910_020 Hb_089889_020--Hb_001910_020 Hb_017259_010 Hb_017259_010 Hb_089889_020--Hb_017259_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.2649 13.3375 13.0543 3.14012 44.2324 41.9598
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.40215 5.52921 0 0 0

CAGE analysis