Hb_001677_070

Information

Type -
Description -
Location Contig1677: 51428-52805
Sequence    

Annotation

kegg
ID rcu:RCOM_1148460
description o-methyltransferase, putative (EC:2.1.1.104)
nr
ID XP_012072340.1
description PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Jatropha curcas]
swissprot
ID P93711
description Caffeoyl-CoA O-methyltransferase OS=Populus kitakamiensis PE=2 SV=1
trembl
ID A0A067KT49
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04786 PE=4 SV=1
Gene Ontology
ID GO:0005829
description caffeoyl- o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001677_070 0.0 - - PREDICTED: putative caffeoyl-CoA O-methyltransferase At1g67980 [Jatropha curcas]
2 Hb_000175_110 0.0605608017 - - hypothetical protein JCGZ_06125 [Jatropha curcas]
3 Hb_000243_180 0.0821563056 - - PREDICTED: aldehyde dehydrogenase family 3 member F1 [Jatropha curcas]
4 Hb_000563_110 0.0869317036 - - PREDICTED: uncharacterized protein LOC100306381 isoform X1 [Glycine max]
5 Hb_004117_060 0.087041001 - - PREDICTED: GDSL esterase/lipase At1g33811 [Jatropha curcas]
6 Hb_001921_040 0.0909337094 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
7 Hb_000023_030 0.0913827372 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein HDG5 [Jatropha curcas]
8 Hb_002235_260 0.0921041348 transcription factor TF Family: MYB hypothetical protein POPTR_0017s12230g [Populus trichocarpa]
9 Hb_002045_020 0.0923602112 transcription factor TF Family: AUX/IAA auxin-induced protein aux28 [Populus trichocarpa]
10 Hb_003226_040 0.0937843567 - - PREDICTED: endoglucanase 17 [Populus euphratica]
11 Hb_012368_040 0.1008275002 - - conserved hypothetical protein [Ricinus communis]
12 Hb_000375_200 0.1022295759 - - cyanohydrin UDP-glucosyltransferase UGT85K5 [Manihot esculenta]
13 Hb_003464_040 0.1032141175 transcription factor TF Family: HB homeobox protein, putative [Ricinus communis]
14 Hb_007558_060 0.1044280132 - - PREDICTED: uncharacterized protein LOC105644482 [Jatropha curcas]
15 Hb_008165_010 0.1068490481 - - PREDICTED: 36.4 kDa proline-rich protein [Solanum lycopersicum]
16 Hb_000152_580 0.1069240626 - - PREDICTED: 21 kDa protein-like [Jatropha curcas]
17 Hb_088118_010 0.1081189023 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
18 Hb_002205_220 0.1096265196 transcription factor TF Family: Orphans two-component system sensor histidine kinase/response regulator, putative [Ricinus communis]
19 Hb_018663_010 0.1101180759 transcription factor TF Family: C2C2-YABBY PREDICTED: axial regulator YABBY 5 [Jatropha curcas]
20 Hb_008642_020 0.1123383747 - - sterol desaturase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001677_070 Hb_001677_070 Hb_000175_110 Hb_000175_110 Hb_001677_070--Hb_000175_110 Hb_000243_180 Hb_000243_180 Hb_001677_070--Hb_000243_180 Hb_000563_110 Hb_000563_110 Hb_001677_070--Hb_000563_110 Hb_004117_060 Hb_004117_060 Hb_001677_070--Hb_004117_060 Hb_001921_040 Hb_001921_040 Hb_001677_070--Hb_001921_040 Hb_000023_030 Hb_000023_030 Hb_001677_070--Hb_000023_030 Hb_000175_110--Hb_000563_110 Hb_028995_020 Hb_028995_020 Hb_000175_110--Hb_028995_020 Hb_011218_020 Hb_011218_020 Hb_000175_110--Hb_011218_020 Hb_012368_040 Hb_012368_040 Hb_000175_110--Hb_012368_040 Hb_001652_090 Hb_001652_090 Hb_000175_110--Hb_001652_090 Hb_003226_040 Hb_003226_040 Hb_000243_180--Hb_003226_040 Hb_000243_180--Hb_004117_060 Hb_002235_260 Hb_002235_260 Hb_000243_180--Hb_002235_260 Hb_000243_180--Hb_001921_040 Hb_006909_050 Hb_006909_050 Hb_000243_180--Hb_006909_050 Hb_000563_110--Hb_001652_090 Hb_008642_020 Hb_008642_020 Hb_000563_110--Hb_008642_020 Hb_000005_390 Hb_000005_390 Hb_000563_110--Hb_000005_390 Hb_002045_020 Hb_002045_020 Hb_000563_110--Hb_002045_020 Hb_000563_110--Hb_012368_040 Hb_004117_060--Hb_002235_260 Hb_004117_060--Hb_000023_030 Hb_004117_060--Hb_001921_040 Hb_008165_010 Hb_008165_010 Hb_004117_060--Hb_008165_010 Hb_004117_060--Hb_002045_020 Hb_019762_030 Hb_019762_030 Hb_004117_060--Hb_019762_030 Hb_001921_040--Hb_002235_260 Hb_001926_010 Hb_001926_010 Hb_001921_040--Hb_001926_010 Hb_005198_010 Hb_005198_010 Hb_001921_040--Hb_005198_010 Hb_001921_040--Hb_003226_040 Hb_000023_030--Hb_002045_020 Hb_000023_030--Hb_003226_040 Hb_000005_160 Hb_000005_160 Hb_000023_030--Hb_000005_160 Hb_000023_030--Hb_002235_260 Hb_000023_030--Hb_000563_110
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 1.39124 0.1901 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.025461 0.123997

CAGE analysis