Hb_001586_040

Information

Type -
Description -
Location Contig1586: 68155-70549
Sequence    

Annotation

kegg
ID rcu:RCOM_0790520
description Protein Z, putative
nr
ID KDP45580.1
description hypothetical protein JCGZ_17187 [Jatropha curcas]
swissprot
ID Q9SIR9
description Serpin-Z10 OS=Arabidopsis thaliana GN=At2g25240 PE=2 SV=1
trembl
ID A0A067LLE7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17187 PE=3 SV=1
Gene Ontology
ID GO:0005615
description serine protease inhibitor family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_14046: 67412-68693
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001586_040 0.0 - - hypothetical protein JCGZ_17187 [Jatropha curcas]
2 Hb_000649_070 0.0764241423 - - PREDICTED: probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 [Jatropha curcas]
3 Hb_000174_110 0.0773512701 - - PREDICTED: INO80 complex subunit D-like [Jatropha curcas]
4 Hb_005618_160 0.0785521651 - - PREDICTED: putative proline--tRNA ligase C19C7.06 [Jatropha curcas]
5 Hb_002739_050 0.0791735384 - - PREDICTED: uncharacterized aarF domain-containing protein kinase 1 isoform X2 [Jatropha curcas]
6 Hb_001329_130 0.0804993282 - - conserved hypothetical protein [Ricinus communis]
7 Hb_010068_040 0.0805463928 - - PREDICTED: uncharacterized protein LOC105632964 [Jatropha curcas]
8 Hb_003687_230 0.0811519145 - - PREDICTED: actin-depolymerizing factor-like [Jatropha curcas]
9 Hb_033153_070 0.0813470217 - - PREDICTED: uncharacterized protein LOC105649606 isoform X1 [Jatropha curcas]
10 Hb_003292_040 0.0848123616 transcription factor TF Family: MBF1 uncharacterized protein LOC100500420 [Glycine max]
11 Hb_003029_030 0.0859664074 - - PREDICTED: uncharacterized protein LOC105642632 isoform X2 [Jatropha curcas]
12 Hb_000610_010 0.0872273907 - - PREDICTED: SKP1-like protein 1B [Musa acuminata subsp. malaccensis]
13 Hb_000771_080 0.0882448775 - - PREDICTED: cyclic nucleotide-gated ion channel 1-like [Jatropha curcas]
14 Hb_000144_100 0.0905039695 - - PREDICTED: iron-sulfur assembly protein IscA-like 2, mitochondrial [Jatropha curcas]
15 Hb_010368_020 0.0908958608 - - PREDICTED: uncharacterized protein LOC105630301 [Jatropha curcas]
16 Hb_033720_010 0.0917358764 - - PREDICTED: uncharacterized protein LOC105648843 [Jatropha curcas]
17 Hb_002296_050 0.0920218712 - - hypothetical protein AMTR_s00001p00247600 [Amborella trichopoda]
18 Hb_001564_130 0.0923083976 - - PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X1 [Jatropha curcas]
19 Hb_006960_050 0.0923835681 - - PREDICTED: PRKR-interacting protein 1 [Jatropha curcas]
20 Hb_002154_120 0.0933940057 - - PREDICTED: uncharacterized protein LOC105630563 [Jatropha curcas]

Gene co-expression network

sample Hb_001586_040 Hb_001586_040 Hb_000649_070 Hb_000649_070 Hb_001586_040--Hb_000649_070 Hb_000174_110 Hb_000174_110 Hb_001586_040--Hb_000174_110 Hb_005618_160 Hb_005618_160 Hb_001586_040--Hb_005618_160 Hb_002739_050 Hb_002739_050 Hb_001586_040--Hb_002739_050 Hb_001329_130 Hb_001329_130 Hb_001586_040--Hb_001329_130 Hb_010068_040 Hb_010068_040 Hb_001586_040--Hb_010068_040 Hb_006960_050 Hb_006960_050 Hb_000649_070--Hb_006960_050 Hb_000649_070--Hb_001329_130 Hb_033153_070 Hb_033153_070 Hb_000649_070--Hb_033153_070 Hb_079526_030 Hb_079526_030 Hb_000649_070--Hb_079526_030 Hb_000334_270 Hb_000334_270 Hb_000649_070--Hb_000334_270 Hb_020367_050 Hb_020367_050 Hb_000649_070--Hb_020367_050 Hb_000174_110--Hb_010068_040 Hb_006620_020 Hb_006620_020 Hb_000174_110--Hb_006620_020 Hb_000174_110--Hb_005618_160 Hb_054865_100 Hb_054865_100 Hb_000174_110--Hb_054865_100 Hb_002175_030 Hb_002175_030 Hb_000174_110--Hb_002175_030 Hb_001486_340 Hb_001486_340 Hb_000174_110--Hb_001486_340 Hb_005618_160--Hb_054865_100 Hb_011970_030 Hb_011970_030 Hb_005618_160--Hb_011970_030 Hb_000462_140 Hb_000462_140 Hb_005618_160--Hb_000462_140 Hb_003010_030 Hb_003010_030 Hb_005618_160--Hb_003010_030 Hb_002495_040 Hb_002495_040 Hb_005618_160--Hb_002495_040 Hb_003428_030 Hb_003428_030 Hb_002739_050--Hb_003428_030 Hb_002253_100 Hb_002253_100 Hb_002739_050--Hb_002253_100 Hb_000093_160 Hb_000093_160 Hb_002739_050--Hb_000093_160 Hb_002739_050--Hb_005618_160 Hb_007672_060 Hb_007672_060 Hb_002739_050--Hb_007672_060 Hb_000260_100 Hb_000260_100 Hb_001329_130--Hb_000260_100 Hb_001329_130--Hb_020367_050 Hb_000236_240 Hb_000236_240 Hb_001329_130--Hb_000236_240 Hb_005288_150 Hb_005288_150 Hb_001329_130--Hb_005288_150 Hb_001329_130--Hb_006960_050 Hb_010068_040--Hb_033153_070 Hb_010068_040--Hb_000334_270 Hb_010068_040--Hb_002175_030 Hb_003029_030 Hb_003029_030 Hb_010068_040--Hb_003029_030 Hb_001433_070 Hb_001433_070 Hb_010068_040--Hb_001433_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.3387 11.4376 13.5125 9.22335 22.2702 14.6605
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.9835 18.8994 6.16345 5.71437 9.08395

CAGE analysis