Hb_001584_130

Information

Type -
Description -
Location Contig1584: 97915-98412
Sequence    

Annotation

kegg
ID rcu:RCOM_1435680
description hypothetical protein
nr
ID XP_012088865.1
description PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JKM9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23201 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_13966: 97866-98547
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001584_130 0.0 - - PREDICTED: uncharacterized protein LOC105647410 [Jatropha curcas]
2 Hb_001004_080 0.0725473628 - - hypothetical protein POPTR_0014s14130g [Populus trichocarpa]
3 Hb_000445_150 0.1532966499 - - PREDICTED: UDP-sugar pyrophosphorylase [Jatropha curcas]
4 Hb_003647_020 0.1681918853 - - hypothetical protein JCGZ_25095 [Jatropha curcas]
5 Hb_012339_010 0.1701909052 - - conserved hypothetical protein [Ricinus communis]
6 Hb_001049_150 0.1788042152 - - PREDICTED: probable beta-1,3-galactosyltransferase 11 [Jatropha curcas]
7 Hb_003994_300 0.1808212163 - - conserved hypothetical protein [Ricinus communis]
8 Hb_002157_270 0.1844806939 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
9 Hb_011310_040 0.1874968395 transcription factor TF Family: bZIP transcription factor hy5, putative [Ricinus communis]
10 Hb_003058_230 0.1894745826 - - copper ion binding protein, putative [Ricinus communis]
11 Hb_000556_010 0.1896730428 - - glycerate dehydrogenase, putative [Ricinus communis]
12 Hb_009913_040 0.1908049155 - - PREDICTED: transmembrane protein 87B [Jatropha curcas]
13 Hb_001976_060 0.1925347447 - - PREDICTED: nucleobase-ascorbate transporter 11 isoform X1 [Jatropha curcas]
14 Hb_006634_110 0.1934102189 - - BnaC04g40780D [Brassica napus]
15 Hb_001864_080 0.1954446149 - - PREDICTED: uncharacterized protein LOC105649405 [Jatropha curcas]
16 Hb_003462_110 0.2022388834 - - hevamine-A precursor, putative [Ricinus communis]
17 Hb_000300_480 0.2025664589 - - hypothetical protein RCOM_1321910 [Ricinus communis]
18 Hb_000246_130 0.2040769344 - - tubulin alpha chain, putative [Ricinus communis]
19 Hb_002596_080 0.204206517 - - PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Jatropha curcas]
20 Hb_000665_190 0.2052459168 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_001584_130 Hb_001584_130 Hb_001004_080 Hb_001004_080 Hb_001584_130--Hb_001004_080 Hb_000445_150 Hb_000445_150 Hb_001584_130--Hb_000445_150 Hb_003647_020 Hb_003647_020 Hb_001584_130--Hb_003647_020 Hb_012339_010 Hb_012339_010 Hb_001584_130--Hb_012339_010 Hb_001049_150 Hb_001049_150 Hb_001584_130--Hb_001049_150 Hb_003994_300 Hb_003994_300 Hb_001584_130--Hb_003994_300 Hb_001004_080--Hb_012339_010 Hb_009913_040 Hb_009913_040 Hb_001004_080--Hb_009913_040 Hb_001004_080--Hb_003994_300 Hb_001004_080--Hb_000445_150 Hb_011310_040 Hb_011310_040 Hb_001004_080--Hb_011310_040 Hb_002596_080 Hb_002596_080 Hb_000445_150--Hb_002596_080 Hb_000417_170 Hb_000417_170 Hb_000445_150--Hb_000417_170 Hb_000445_150--Hb_003994_300 Hb_002157_270 Hb_002157_270 Hb_000445_150--Hb_002157_270 Hb_000445_150--Hb_011310_040 Hb_001976_060 Hb_001976_060 Hb_003647_020--Hb_001976_060 Hb_003647_020--Hb_001004_080 Hb_000317_450 Hb_000317_450 Hb_003647_020--Hb_000317_450 Hb_003647_020--Hb_001049_150 Hb_001623_080 Hb_001623_080 Hb_003647_020--Hb_001623_080 Hb_000665_190 Hb_000665_190 Hb_012339_010--Hb_000665_190 Hb_011926_040 Hb_011926_040 Hb_012339_010--Hb_011926_040 Hb_012339_010--Hb_003994_300 Hb_012339_010--Hb_001049_150 Hb_000399_060 Hb_000399_060 Hb_012339_010--Hb_000399_060 Hb_002174_040 Hb_002174_040 Hb_012339_010--Hb_002174_040 Hb_001049_150--Hb_000665_190 Hb_001049_150--Hb_001623_080 Hb_001049_150--Hb_011926_040 Hb_026549_070 Hb_026549_070 Hb_001049_150--Hb_026549_070 Hb_000062_400 Hb_000062_400 Hb_001049_150--Hb_000062_400 Hb_001049_150--Hb_001976_060 Hb_003994_300--Hb_000665_190 Hb_027445_030 Hb_027445_030 Hb_003994_300--Hb_027445_030 Hb_007477_050 Hb_007477_050 Hb_003994_300--Hb_007477_050 Hb_003746_010 Hb_003746_010 Hb_003994_300--Hb_003746_010 Hb_003994_300--Hb_001049_150 Hb_003994_300--Hb_000399_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
31.1861 12.6638 88.3802 405.675 82.5878 45.2993
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
51.6084 66.441 24.2537 9.84296 223.416

CAGE analysis