Hb_001501_050

Information

Type -
Description -
Location Contig1501: 66230-78496
Sequence    

Annotation

kegg
ID tcc:TCM_021128
description Wall associated kinase-like 6, putative
nr
ID XP_007035468.1
description Wall associated kinase-like 6, putative [Theobroma cacao]
swissprot
ID Q7X8C5
description Wall-associated receptor kinase-like 2 OS=Arabidopsis thaliana GN=WAKL2 PE=2 SV=1
trembl
ID A0A061EVT5
description Wall associated kinase-like 6, putative OS=Theobroma cacao GN=TCM_021128 PE=4 SV=1
Gene Ontology
ID GO:0004672
description wall-associated kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001501_050 0.0 - - Wall associated kinase-like 6, putative [Theobroma cacao]
2 Hb_000684_170 0.035267203 - - -
3 Hb_001218_080 0.1974173242 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
4 Hb_156850_110 0.2408271137 - - PREDICTED: vinorine synthase-like [Jatropha curcas]
5 Hb_007292_030 0.2424138786 - - conserved hypothetical protein [Ricinus communis]
6 Hb_113388_010 0.2522155222 - - conserved hypothetical protein [Ricinus communis]
7 Hb_003849_230 0.2533747653 - - PREDICTED: NEP1-interacting protein 2-like [Jatropha curcas]
8 Hb_000575_130 0.2536043901 - - PREDICTED: putative G-type lectin S-receptor-like serine/threonine-protein kinase At1g61610 [Populus euphratica]
9 Hb_000563_450 0.2544074809 - - PREDICTED: uncharacterized protein LOC103419743 [Malus domestica]
10 Hb_005214_020 0.2559287354 - - hypothetical protein JCGZ_12886 [Jatropha curcas]
11 Hb_119789_010 0.2591144253 - - PREDICTED: uncharacterized protein LOC105134438 [Populus euphratica]
12 Hb_156055_020 0.2591515957 - - conserved hypothetical protein [Ricinus communis]
13 Hb_004899_160 0.2594154773 - - -
14 Hb_000896_140 0.2602135756 - - PREDICTED: zinc finger Ran-binding domain-containing protein 2 [Jatropha curcas]
15 Hb_007040_030 0.2602691289 - - PREDICTED: uncharacterized protein LOC103415345 [Malus domestica]
16 Hb_000926_170 0.2609479268 - - conserved hypothetical protein [Ricinus communis]
17 Hb_021409_060 0.2611969989 - - PREDICTED: aluminum-activated malate transporter 10-like [Jatropha curcas]
18 Hb_168436_010 0.2618113757 - - PREDICTED: probable receptor-like protein kinase At1g67000-like [Citrus sinensis]
19 Hb_002127_010 0.2631182216 - - Aluminum activated malate transporter family protein, putative [Theobroma cacao]
20 Hb_001268_360 0.264791925 - - PREDICTED: uncharacterized protein LOC104447679 [Eucalyptus grandis]

Gene co-expression network

sample Hb_001501_050 Hb_001501_050 Hb_000684_170 Hb_000684_170 Hb_001501_050--Hb_000684_170 Hb_001218_080 Hb_001218_080 Hb_001501_050--Hb_001218_080 Hb_156850_110 Hb_156850_110 Hb_001501_050--Hb_156850_110 Hb_007292_030 Hb_007292_030 Hb_001501_050--Hb_007292_030 Hb_113388_010 Hb_113388_010 Hb_001501_050--Hb_113388_010 Hb_003849_230 Hb_003849_230 Hb_001501_050--Hb_003849_230 Hb_000684_170--Hb_001218_080 Hb_000684_170--Hb_113388_010 Hb_000896_140 Hb_000896_140 Hb_000684_170--Hb_000896_140 Hb_007040_030 Hb_007040_030 Hb_000684_170--Hb_007040_030 Hb_000926_170 Hb_000926_170 Hb_000684_170--Hb_000926_170 Hb_001218_080--Hb_156850_110 Hb_172632_020 Hb_172632_020 Hb_001218_080--Hb_172632_020 Hb_000270_850 Hb_000270_850 Hb_001218_080--Hb_000270_850 Hb_084611_010 Hb_084611_010 Hb_001218_080--Hb_084611_010 Hb_156850_110--Hb_000270_850 Hb_138628_010 Hb_138628_010 Hb_156850_110--Hb_138628_010 Hb_002205_260 Hb_002205_260 Hb_156850_110--Hb_002205_260 Hb_089140_020 Hb_089140_020 Hb_156850_110--Hb_089140_020 Hb_189242_010 Hb_189242_010 Hb_156850_110--Hb_189242_010 Hb_007292_030--Hb_003849_230 Hb_000575_130 Hb_000575_130 Hb_007292_030--Hb_000575_130 Hb_000563_450 Hb_000563_450 Hb_007292_030--Hb_000563_450 Hb_000486_050 Hb_000486_050 Hb_007292_030--Hb_000486_050 Hb_007292_030--Hb_113388_010 Hb_000380_070 Hb_000380_070 Hb_007292_030--Hb_000380_070 Hb_089032_060 Hb_089032_060 Hb_113388_010--Hb_089032_060 Hb_032299_030 Hb_032299_030 Hb_113388_010--Hb_032299_030 Hb_113388_010--Hb_000380_070 Hb_004352_020 Hb_004352_020 Hb_113388_010--Hb_004352_020 Hb_113388_010--Hb_003849_230 Hb_003849_230--Hb_000575_130 Hb_003849_230--Hb_000563_450 Hb_003849_230--Hb_000486_050 Hb_001854_010 Hb_001854_010 Hb_003849_230--Hb_001854_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0250366 0.00358847 0 0 0.00419987
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis