Hb_001339_030

Information

Type transcription factor
Description TF Family: zf-HD
Location Contig1339: 99541-100488
Sequence    

Annotation

kegg
ID rcu:RCOM_0836390
description transcription factor, putative
nr
ID XP_012067639.1
description PREDICTED: zinc-finger homeodomain protein 11-like [Jatropha curcas]
swissprot
ID Q9SEZ1
description Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana GN=ZHD11 PE=1 SV=1
trembl
ID A0A067KYG4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15604 PE=4 SV=1
Gene Ontology
ID GO:0003677
description zinc-finger homeodomain protein 11-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001339_030 0.0 transcription factor TF Family: zf-HD PREDICTED: zinc-finger homeodomain protein 11-like [Jatropha curcas]
2 Hb_000045_080 0.0959775588 - - amino acid transporter, putative [Ricinus communis]
3 Hb_002168_070 0.1212436463 - - Jasmonate O-methyltransferase, putative [Ricinus communis]
4 Hb_017862_030 0.1221689684 - - PREDICTED: proteasome assembly chaperone 4 [Jatropha curcas]
5 Hb_000069_540 0.1251788113 - - PREDICTED: hydroquinone glucosyltransferase [Jatropha curcas]
6 Hb_000434_060 0.1273823076 desease resistance Gene Name: hmm Disease resistance protein RPM1, putative [Ricinus communis]
7 Hb_009771_040 0.1283709466 - - hypothetical protein JCGZ_25039 [Jatropha curcas]
8 Hb_005051_010 0.1292243585 transcription factor TF Family: Trihelix transcription factor, putative [Ricinus communis]
9 Hb_002043_070 0.1297260837 - - PREDICTED: jacalin-related lectin 19 [Jatropha curcas]
10 Hb_008598_010 0.130044039 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
11 Hb_005643_040 0.1307968847 - - zinc finger protein, putative [Ricinus communis]
12 Hb_002151_020 0.1322667968 - - PREDICTED: uncharacterized protein LOC105637945 [Jatropha curcas]
13 Hb_000418_120 0.1330967045 - - PREDICTED: glucan endo-1,3-beta-glucosidase [Jatropha curcas]
14 Hb_002053_190 0.1334882305 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
15 Hb_002902_040 0.1343863116 - - PREDICTED: peroxidase 51 [Jatropha curcas]
16 Hb_007221_040 0.1373507307 - - PREDICTED: probable receptor-like protein kinase At5g24010 isoform X2 [Populus euphratica]
17 Hb_003454_050 0.1381100306 - - PREDICTED: probable methyltransferase PMT14 [Jatropha curcas]
18 Hb_000429_160 0.1385211043 - - PREDICTED: uncharacterized protein LOC105645177 [Jatropha curcas]
19 Hb_002902_070 0.1388562071 - - PREDICTED: BTB/POZ domain-containing protein At5g67385 [Jatropha curcas]
20 Hb_003147_040 0.1389154875 - - PREDICTED: probable calcium-binding protein CML18 [Jatropha curcas]

Gene co-expression network

sample Hb_001339_030 Hb_001339_030 Hb_000045_080 Hb_000045_080 Hb_001339_030--Hb_000045_080 Hb_002168_070 Hb_002168_070 Hb_001339_030--Hb_002168_070 Hb_017862_030 Hb_017862_030 Hb_001339_030--Hb_017862_030 Hb_000069_540 Hb_000069_540 Hb_001339_030--Hb_000069_540 Hb_000434_060 Hb_000434_060 Hb_001339_030--Hb_000434_060 Hb_009771_040 Hb_009771_040 Hb_001339_030--Hb_009771_040 Hb_008598_010 Hb_008598_010 Hb_000045_080--Hb_008598_010 Hb_000045_080--Hb_017862_030 Hb_026144_040 Hb_026144_040 Hb_000045_080--Hb_026144_040 Hb_000162_070 Hb_000162_070 Hb_000045_080--Hb_000162_070 Hb_002151_020 Hb_002151_020 Hb_000045_080--Hb_002151_020 Hb_000384_020 Hb_000384_020 Hb_000045_080--Hb_000384_020 Hb_002168_070--Hb_009771_040 Hb_002043_070 Hb_002043_070 Hb_002168_070--Hb_002043_070 Hb_002168_070--Hb_000434_060 Hb_002053_190 Hb_002053_190 Hb_002168_070--Hb_002053_190 Hb_001405_170 Hb_001405_170 Hb_002168_070--Hb_001405_170 Hb_005211_210 Hb_005211_210 Hb_002168_070--Hb_005211_210 Hb_043630_030 Hb_043630_030 Hb_017862_030--Hb_043630_030 Hb_122951_010 Hb_122951_010 Hb_017862_030--Hb_122951_010 Hb_017862_030--Hb_008598_010 Hb_017862_030--Hb_002151_020 Hb_017862_030--Hb_026144_040 Hb_002902_070 Hb_002902_070 Hb_000069_540--Hb_002902_070 Hb_144703_010 Hb_144703_010 Hb_000069_540--Hb_144703_010 Hb_019496_040 Hb_019496_040 Hb_000069_540--Hb_019496_040 Hb_000868_130 Hb_000868_130 Hb_000069_540--Hb_000868_130 Hb_000069_540--Hb_008598_010 Hb_002902_040 Hb_002902_040 Hb_000069_540--Hb_002902_040 Hb_000434_060--Hb_005211_210 Hb_000434_060--Hb_002043_070 Hb_000434_060--Hb_009771_040 Hb_005051_010 Hb_005051_010 Hb_000434_060--Hb_005051_010 Hb_007221_040 Hb_007221_040 Hb_000434_060--Hb_007221_040 Hb_026050_010 Hb_026050_010 Hb_009771_040--Hb_026050_010 Hb_002250_140 Hb_002250_140 Hb_009771_040--Hb_002250_140 Hb_000258_230 Hb_000258_230 Hb_009771_040--Hb_000258_230 Hb_173107_020 Hb_173107_020 Hb_009771_040--Hb_173107_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.526563 4.64829 4.45151 10.1173 0.0221573 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 1.44147 7.03339

CAGE analysis