Hb_000923_090

Information

Type -
Description -
Location Contig923: 158955-161356
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000923_090 0.0 - - -
2 Hb_000390_140 0.1061080732 - - PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Jatropha curcas]
3 Hb_004162_210 0.1097784625 - - Cyclin-dependent kinases regulatory subunit, putative [Ricinus communis]
4 Hb_008695_050 0.1119046833 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004800_060 0.1123169486 - - PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]
6 Hb_002609_160 0.1246574184 - - PREDICTED: GDP-mannose transporter GONST2 [Jatropha curcas]
7 Hb_007894_060 0.1253985979 - - PREDICTED: ubiquitin thioesterase OTU1 [Jatropha curcas]
8 Hb_000009_290 0.1328190089 - - PREDICTED: cold-regulated 413 plasma membrane protein 4-like [Jatropha curcas]
9 Hb_010560_030 0.1333029538 - - PREDICTED: mitochondrial pyruvate carrier 4-like [Jatropha curcas]
10 Hb_003106_220 0.1339810431 - - PREDICTED: succinate dehydrogenase subunit 7B, mitochondrial-like isoform X1 [Jatropha curcas]
11 Hb_000072_210 0.134297142 - - PREDICTED: pentatricopeptide repeat-containing protein At5g38730 [Jatropha curcas]
12 Hb_000849_130 0.1350335011 - - PREDICTED: adrenodoxin-like protein, mitochondrial [Nelumbo nucifera]
13 Hb_001369_250 0.1381966487 - - PREDICTED: uncharacterized protein LOC105646469 isoform X1 [Jatropha curcas]
14 Hb_004734_040 0.1393398752 - - eukaryotic translation initiation factor 5A isoform I [Hevea brasiliensis]
15 Hb_006698_030 0.1393779091 - - PREDICTED: uncharacterized protein LOC105633969 [Jatropha curcas]
16 Hb_000538_120 0.1399395666 transcription factor TF Family: SET PREDICTED: protein SET DOMAIN GROUP 40 [Jatropha curcas]
17 Hb_002027_390 0.1405361299 - - shikimate dehydrogenase, putative [Ricinus communis]
18 Hb_000085_350 0.1407298101 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-2-like isoform X1 [Jatropha curcas]
19 Hb_000525_020 0.1420515226 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
20 Hb_005391_040 0.1428036804 - - PREDICTED: 1,4-dihydroxy-2-naphthoyl-CoA thioesterase 1 [Jatropha curcas]

Gene co-expression network

sample Hb_000923_090 Hb_000923_090 Hb_000390_140 Hb_000390_140 Hb_000923_090--Hb_000390_140 Hb_004162_210 Hb_004162_210 Hb_000923_090--Hb_004162_210 Hb_008695_050 Hb_008695_050 Hb_000923_090--Hb_008695_050 Hb_004800_060 Hb_004800_060 Hb_000923_090--Hb_004800_060 Hb_002609_160 Hb_002609_160 Hb_000923_090--Hb_002609_160 Hb_007894_060 Hb_007894_060 Hb_000923_090--Hb_007894_060 Hb_000390_140--Hb_008695_050 Hb_000072_210 Hb_000072_210 Hb_000390_140--Hb_000072_210 Hb_000390_140--Hb_002609_160 Hb_002636_080 Hb_002636_080 Hb_000390_140--Hb_002636_080 Hb_004734_040 Hb_004734_040 Hb_000390_140--Hb_004734_040 Hb_001047_240 Hb_001047_240 Hb_004162_210--Hb_001047_240 Hb_004162_210--Hb_004800_060 Hb_007875_030 Hb_007875_030 Hb_004162_210--Hb_007875_030 Hb_153544_010 Hb_153544_010 Hb_004162_210--Hb_153544_010 Hb_124953_020 Hb_124953_020 Hb_004162_210--Hb_124953_020 Hb_006915_040 Hb_006915_040 Hb_004162_210--Hb_006915_040 Hb_001057_040 Hb_001057_040 Hb_008695_050--Hb_001057_040 Hb_001653_020 Hb_001653_020 Hb_008695_050--Hb_001653_020 Hb_005307_050 Hb_005307_050 Hb_008695_050--Hb_005307_050 Hb_000207_400 Hb_000207_400 Hb_008695_050--Hb_000207_400 Hb_000414_130 Hb_000414_130 Hb_008695_050--Hb_000414_130 Hb_007928_030 Hb_007928_030 Hb_008695_050--Hb_007928_030 Hb_004800_060--Hb_124953_020 Hb_003106_220 Hb_003106_220 Hb_004800_060--Hb_003106_220 Hb_001016_150 Hb_001016_150 Hb_004800_060--Hb_001016_150 Hb_000172_640 Hb_000172_640 Hb_004800_060--Hb_000172_640 Hb_126861_010 Hb_126861_010 Hb_004800_060--Hb_126861_010 Hb_000030_200 Hb_000030_200 Hb_002609_160--Hb_000030_200 Hb_002609_160--Hb_006915_040 Hb_150930_010 Hb_150930_010 Hb_002609_160--Hb_150930_010 Hb_002609_160--Hb_005307_050 Hb_000087_130 Hb_000087_130 Hb_002609_160--Hb_000087_130 Hb_007894_060--Hb_007928_030 Hb_000538_120 Hb_000538_120 Hb_007894_060--Hb_000538_120 Hb_001301_110 Hb_001301_110 Hb_007894_060--Hb_001301_110 Hb_002301_150 Hb_002301_150 Hb_007894_060--Hb_002301_150 Hb_000136_260 Hb_000136_260 Hb_007894_060--Hb_000136_260 Hb_000069_720 Hb_000069_720 Hb_007894_060--Hb_000069_720
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.17741 0.964639 1.50376 2.97551 0.371806 1.0066
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.2718 3.77945 1.03561 2.39343 0.575482

CAGE analysis