Hb_126861_010

Information

Type -
Description -
Location Contig126861: 2234-3173
Sequence    

Annotation

kegg
ID obr:102707998
description notchless protein homolog
nr
ID EPS68854.1
description hypothetical protein M569_05914, partial [Genlisea aurea]
swissprot
ID Q9FLX9
description Notchless protein homolog OS=Arabidopsis thaliana GN=NLE1 PE=2 SV=1
trembl
ID S8CP06
description Uncharacterized protein (Fragment) OS=Genlisea aurea GN=M569_05914 PE=4 SV=1
Gene Ontology
ID GO:0080008
description notchless-like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_126861_010 0.0 - - hypothetical protein M569_05914, partial [Genlisea aurea]
2 Hb_003185_110 0.090227041 - - PREDICTED: cytochrome b-c1 complex subunit 7-2 [Nelumbo nucifera]
3 Hb_153544_010 0.0979664198 - - PREDICTED: coiled-coil domain-containing protein 130-like [Populus euphratica]
4 Hb_004800_060 0.1006205881 - - PREDICTED: uncharacterized protein LOC105643856 [Jatropha curcas]
5 Hb_001141_140 0.1011026319 - - 20S proteasome beta subunit D3 [Hevea brasiliensis]
6 Hb_139294_020 0.1022439587 - - vat protein [Cucumis melo]
7 Hb_003018_020 0.1072497893 - - PREDICTED: uncharacterized protein LOC105628697 [Jatropha curcas]
8 Hb_124953_020 0.1078521266 - - Mitochondrial import inner membrane translocase subunit Tim13, putative [Ricinus communis]
9 Hb_000506_070 0.1142624096 - - PREDICTED: 60S ribosomal protein L35 [Jatropha curcas]
10 Hb_000260_550 0.1163079573 - - PREDICTED: 60S ribosomal protein L13-1-like [Jatropha curcas]
11 Hb_010175_040 0.1166779789 - - PREDICTED: cytochrome c oxidase subunit 6a, mitochondrial [Jatropha curcas]
12 Hb_000356_090 0.1166870188 - - PREDICTED: uncharacterized protein At2g38710 [Jatropha curcas]
13 Hb_003053_010 0.1185250781 - - PREDICTED: uncharacterized protein LOC105641481 isoform X2 [Jatropha curcas]
14 Hb_000025_620 0.1185413388 - - hypothetical protein POPTR_0009s05200g [Populus trichocarpa]
15 Hb_000302_140 0.11863958 - - PREDICTED: probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 5, mitochondrial [Jatropha curcas]
16 Hb_000417_360 0.1190271783 - - PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Jatropha curcas]
17 Hb_002217_050 0.1191552964 - - PREDICTED: uncharacterized protein LOC104607091 isoform X1 [Nelumbo nucifera]
18 Hb_004871_020 0.1192059787 transcription factor TF Family: SWI/SNF-BAF60b PREDICTED: protein TRI1 [Jatropha curcas]
19 Hb_000191_030 0.1192855036 - - hypothetical protein POPTR_0012s07830g [Populus trichocarpa]
20 Hb_004162_210 0.1193515998 - - Cyclin-dependent kinases regulatory subunit, putative [Ricinus communis]

Gene co-expression network

sample Hb_126861_010 Hb_126861_010 Hb_003185_110 Hb_003185_110 Hb_126861_010--Hb_003185_110 Hb_153544_010 Hb_153544_010 Hb_126861_010--Hb_153544_010 Hb_004800_060 Hb_004800_060 Hb_126861_010--Hb_004800_060 Hb_001141_140 Hb_001141_140 Hb_126861_010--Hb_001141_140 Hb_139294_020 Hb_139294_020 Hb_126861_010--Hb_139294_020 Hb_003018_020 Hb_003018_020 Hb_126861_010--Hb_003018_020 Hb_003018_010 Hb_003018_010 Hb_003185_110--Hb_003018_010 Hb_003053_010 Hb_003053_010 Hb_003185_110--Hb_003053_010 Hb_000260_550 Hb_000260_550 Hb_003185_110--Hb_000260_550 Hb_007044_130 Hb_007044_130 Hb_003185_110--Hb_007044_130 Hb_000236_390 Hb_000236_390 Hb_003185_110--Hb_000236_390 Hb_004871_020 Hb_004871_020 Hb_153544_010--Hb_004871_020 Hb_000030_290 Hb_000030_290 Hb_153544_010--Hb_000030_290 Hb_000317_070 Hb_000317_070 Hb_153544_010--Hb_000317_070 Hb_000417_360 Hb_000417_360 Hb_153544_010--Hb_000417_360 Hb_091433_020 Hb_091433_020 Hb_153544_010--Hb_091433_020 Hb_143496_010 Hb_143496_010 Hb_153544_010--Hb_143496_010 Hb_124953_020 Hb_124953_020 Hb_004800_060--Hb_124953_020 Hb_004162_210 Hb_004162_210 Hb_004800_060--Hb_004162_210 Hb_003106_220 Hb_003106_220 Hb_004800_060--Hb_003106_220 Hb_001016_150 Hb_001016_150 Hb_004800_060--Hb_001016_150 Hb_000172_640 Hb_000172_640 Hb_004800_060--Hb_000172_640 Hb_006925_040 Hb_006925_040 Hb_001141_140--Hb_006925_040 Hb_000735_040 Hb_000735_040 Hb_001141_140--Hb_000735_040 Hb_010175_040 Hb_010175_040 Hb_001141_140--Hb_010175_040 Hb_003226_100 Hb_003226_100 Hb_001141_140--Hb_003226_100 Hb_001141_140--Hb_007044_130 Hb_001141_140--Hb_003018_020 Hb_021596_090 Hb_021596_090 Hb_139294_020--Hb_021596_090 Hb_008686_080 Hb_008686_080 Hb_139294_020--Hb_008686_080 Hb_002995_020 Hb_002995_020 Hb_139294_020--Hb_002995_020 Hb_000805_120 Hb_000805_120 Hb_139294_020--Hb_000805_120 Hb_007044_120 Hb_007044_120 Hb_139294_020--Hb_007044_120 Hb_003018_020--Hb_003226_100 Hb_004157_030 Hb_004157_030 Hb_003018_020--Hb_004157_030 Hb_174865_010 Hb_174865_010 Hb_003018_020--Hb_174865_010 Hb_000506_070 Hb_000506_070 Hb_003018_020--Hb_000506_070 Hb_000836_470 Hb_000836_470 Hb_003018_020--Hb_000836_470
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.26509 1.06335 2.73853 1.94003 1.68889 0.957834
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.42011 6.05595 2.00062 2.34905 0.510327

CAGE analysis