Hb_000816_140

Information

Type -
Description -
Location Contig816: 104888-106356
Sequence    

Annotation

kegg
ID cit:102630988
description peroxidase 4-like
nr
ID XP_012091191.1
description PREDICTED: peroxidase 4-like [Jatropha curcas]
swissprot
ID O23237
description Peroxidase 49 OS=Arabidopsis thaliana GN=PER49 PE=2 SV=2
trembl
ID A0A067JFX0
description Peroxidase OS=Jatropha curcas GN=JCGZ_03354 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 4-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_59413: 104778-106345
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000816_140 0.0 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
2 Hb_010883_170 0.0523015444 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
3 Hb_007113_060 0.0668153517 - - PREDICTED: rac-like GTP-binding protein RAC2 [Jatropha curcas]
4 Hb_006922_120 0.0677505018 - - hypothetical protein JCGZ_01146 [Jatropha curcas]
5 Hb_012653_050 0.0702595123 - - hypothetical protein RCOM_0460020 [Ricinus communis]
6 Hb_000815_050 0.0751939011 - - PREDICTED: expansin-A1 [Populus euphratica]
7 Hb_000057_090 0.0756217143 - - hypothetical protein RCOM_1494490 [Ricinus communis]
8 Hb_011549_040 0.0786959931 - - -
9 Hb_000933_030 0.0791826567 transcription factor TF Family: ERF conserved hypothetical protein [Ricinus communis]
10 Hb_004162_200 0.0808665198 - - PREDICTED: uncharacterized protein At1g08160 [Jatropha curcas]
11 Hb_006977_010 0.0825837844 - - unnamed protein product [Vitis vinifera]
12 Hb_001956_130 0.0838960084 - - catalytic, putative [Ricinus communis]
13 Hb_004079_070 0.0841513005 - - hypothetical protein JCGZ_07230 [Jatropha curcas]
14 Hb_166360_010 0.0850876037 - - hypothetical protein POPTR_0010s12130g [Populus trichocarpa]
15 Hb_162450_010 0.0887313481 - - PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Jatropha curcas]
16 Hb_068804_190 0.0903749499 - - kinase, putative [Ricinus communis]
17 Hb_002311_030 0.091108935 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000140_320 0.0935471826 - - delta-8 sphingolipid desaturase [Vernicia fordii]
19 Hb_005532_080 0.0948082016 - - PREDICTED: heparanase-like protein 2 [Jatropha curcas]
20 Hb_004218_270 0.0958228303 - - hypothetical protein CICLE_v100134152mg, partial [Citrus clementina]

Gene co-expression network

sample Hb_000816_140 Hb_000816_140 Hb_010883_170 Hb_010883_170 Hb_000816_140--Hb_010883_170 Hb_007113_060 Hb_007113_060 Hb_000816_140--Hb_007113_060 Hb_006922_120 Hb_006922_120 Hb_000816_140--Hb_006922_120 Hb_012653_050 Hb_012653_050 Hb_000816_140--Hb_012653_050 Hb_000815_050 Hb_000815_050 Hb_000816_140--Hb_000815_050 Hb_000057_090 Hb_000057_090 Hb_000816_140--Hb_000057_090 Hb_010883_170--Hb_012653_050 Hb_004202_020 Hb_004202_020 Hb_010883_170--Hb_004202_020 Hb_002221_060 Hb_002221_060 Hb_010883_170--Hb_002221_060 Hb_010883_170--Hb_006922_120 Hb_006977_010 Hb_006977_010 Hb_010883_170--Hb_006977_010 Hb_007113_060--Hb_006922_120 Hb_005440_040 Hb_005440_040 Hb_007113_060--Hb_005440_040 Hb_002311_030 Hb_002311_030 Hb_007113_060--Hb_002311_030 Hb_004162_200 Hb_004162_200 Hb_007113_060--Hb_004162_200 Hb_162450_010 Hb_162450_010 Hb_007113_060--Hb_162450_010 Hb_006922_120--Hb_006977_010 Hb_013749_040 Hb_013749_040 Hb_006922_120--Hb_013749_040 Hb_006922_120--Hb_005440_040 Hb_000103_450 Hb_000103_450 Hb_012653_050--Hb_000103_450 Hb_000483_450 Hb_000483_450 Hb_012653_050--Hb_000483_450 Hb_012653_050--Hb_004202_020 Hb_012653_050--Hb_000815_050 Hb_000742_070 Hb_000742_070 Hb_000815_050--Hb_000742_070 Hb_023582_030 Hb_023582_030 Hb_000815_050--Hb_023582_030 Hb_000933_030 Hb_000933_030 Hb_000815_050--Hb_000933_030 Hb_004079_070 Hb_004079_070 Hb_000815_050--Hb_004079_070 Hb_000134_190 Hb_000134_190 Hb_000815_050--Hb_000134_190 Hb_068804_190 Hb_068804_190 Hb_000057_090--Hb_068804_190 Hb_011549_040 Hb_011549_040 Hb_000057_090--Hb_011549_040 Hb_049955_010 Hb_049955_010 Hb_000057_090--Hb_049955_010 Hb_056506_040 Hb_056506_040 Hb_000057_090--Hb_056506_040 Hb_000057_090--Hb_010883_170
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.287695 3.00525 103.59 242.224 0.161697 0.290581
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.43152 0.407313 0 0.871076 112.761

CAGE analysis