Hb_000732_280

Information

Type -
Description -
Location Contig732: 273865-274302
Sequence    

Annotation

kegg
ID mdm:103444838
description bifunctional riboflavin kinase/FMN phosphatase
nr
ID KJB57652.1
description hypothetical protein B456_009G173700 [Gossypium raimondii]
swissprot
ID Q9D5U5
description Pseudouridine-5'-phosphatase OS=Mus musculus GN=Hdhd1 PE=2 SV=1
trembl
ID A0A0D2QHZ8
description Gossypium raimondii chromosome 9, whole genome shotgun sequence OS=Gossypium raimondii GN=B456_009G173700 PE=4 SV=1
Gene Ontology
ID GO:0003919
description bifunctional riboflavin kinase fmn phosphatase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000732_280 0.0 - - hypothetical protein B456_009G173700 [Gossypium raimondii]
2 Hb_000080_180 0.1716783894 - - -
3 Hb_005318_020 0.2127860436 - - PREDICTED: lecithin-cholesterol acyltransferase-like 4 isoform X3 [Jatropha curcas]
4 Hb_007447_020 0.2341923937 - - hypothetical protein CISIN_1g038065mg [Citrus sinensis]
5 Hb_000683_090 0.2368465592 - - stress enhanced protein [Medicago truncatula]
6 Hb_000340_330 0.2400286831 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]
7 Hb_060458_010 0.2482908283 - - conserved hypothetical protein [Ricinus communis]
8 Hb_000976_030 0.2605642133 - - PREDICTED: molybdenum cofactor sulfurase-like [Citrus sinensis]
9 Hb_141296_010 0.2627915877 - - -
10 Hb_000617_170 0.2685250099 - - -
11 Hb_005839_010 0.2709928872 - - 30S ribosomal protein s13 [Camellia sinensis]
12 Hb_079978_010 0.2716445904 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP71 isoform X1 [Nelumbo nucifera]
13 Hb_051437_010 0.2730196548 - - PREDICTED: calmodulin-interacting protein 111 isoform X2 [Jatropha curcas]
14 Hb_007083_050 0.2790143014 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform X2 [Nelumbo nucifera]
15 Hb_058702_020 0.2802710558 - - PREDICTED: uncharacterized protein LOC104604814 [Nelumbo nucifera]
16 Hb_001983_010 0.2826707139 - - -
17 Hb_169170_010 0.2837071079 - - PREDICTED: protein disulfide-isomerase 5-1 isoform X2 [Nelumbo nucifera]
18 Hb_134310_020 0.288436667 - - PREDICTED: putative cytochrome c oxidase subunit 5C-4-like [Citrus sinensis]
19 Hb_122567_020 0.2909336335 - - hypothetical protein CICLE_v10009900mg [Citrus clementina]
20 Hb_031866_050 0.2933072213 - - PREDICTED: uncharacterized protein LOC101756357 [Setaria italica]

Gene co-expression network

sample Hb_000732_280 Hb_000732_280 Hb_000080_180 Hb_000080_180 Hb_000732_280--Hb_000080_180 Hb_005318_020 Hb_005318_020 Hb_000732_280--Hb_005318_020 Hb_007447_020 Hb_007447_020 Hb_000732_280--Hb_007447_020 Hb_000683_090 Hb_000683_090 Hb_000732_280--Hb_000683_090 Hb_000340_330 Hb_000340_330 Hb_000732_280--Hb_000340_330 Hb_060458_010 Hb_060458_010 Hb_000732_280--Hb_060458_010 Hb_000080_180--Hb_007447_020 Hb_031866_050 Hb_031866_050 Hb_000080_180--Hb_031866_050 Hb_051437_010 Hb_051437_010 Hb_000080_180--Hb_051437_010 Hb_000080_180--Hb_005318_020 Hb_000080_180--Hb_060458_010 Hb_079978_010 Hb_079978_010 Hb_005318_020--Hb_079978_010 Hb_007083_050 Hb_007083_050 Hb_005318_020--Hb_007083_050 Hb_005318_020--Hb_007447_020 Hb_005318_020--Hb_000683_090 Hb_169170_010 Hb_169170_010 Hb_005318_020--Hb_169170_010 Hb_000084_130 Hb_000084_130 Hb_005318_020--Hb_000084_130 Hb_007447_020--Hb_031866_050 Hb_007447_020--Hb_000683_090 Hb_007447_020--Hb_169170_010 Hb_122567_020 Hb_122567_020 Hb_007447_020--Hb_122567_020 Hb_007447_020--Hb_079978_010 Hb_008096_020 Hb_008096_020 Hb_000683_090--Hb_008096_020 Hb_000683_090--Hb_031866_050 Hb_001222_040 Hb_001222_040 Hb_000683_090--Hb_001222_040 Hb_000683_090--Hb_169170_010 Hb_103093_010 Hb_103093_010 Hb_000340_330--Hb_103093_010 Hb_000130_170 Hb_000130_170 Hb_000340_330--Hb_000130_170 Hb_002450_130 Hb_002450_130 Hb_000340_330--Hb_002450_130 Hb_000340_330--Hb_000683_090 Hb_005723_070 Hb_005723_070 Hb_000340_330--Hb_005723_070 Hb_000340_330--Hb_005318_020 Hb_141296_010 Hb_141296_010 Hb_060458_010--Hb_141296_010 Hb_002126_020 Hb_002126_020 Hb_060458_010--Hb_002126_020 Hb_006422_030 Hb_006422_030 Hb_060458_010--Hb_006422_030 Hb_000082_020 Hb_000082_020 Hb_060458_010--Hb_000082_020 Hb_060458_010--Hb_005318_020 Hb_114079_010 Hb_114079_010 Hb_060458_010--Hb_114079_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.229697 0.459716 0 2.19102 1.35453 8.19963
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.10689 0.588607 0.595613

CAGE analysis