Hb_000186_030

Information

Type -
Description -
Location Contig186: 60489-62227
Sequence    

Annotation

kegg
ID cic:CICLE_v10015536mg
description hypothetical protein
nr
ID XP_012091267.1
description PREDICTED: uncharacterized protein LOC105649276 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JL10
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21156 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_18222: 60538-60934 , PASA_asmbl_18223: 61638-61747 , PASA_asmbl_18224: 61807-62679
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000186_030 0.0 - - PREDICTED: uncharacterized protein LOC105649276 isoform X1 [Jatropha curcas]
2 Hb_000753_110 0.109636223 transcription factor TF Family: bHLH PREDICTED: transcription factor BIM1 isoform X6 [Jatropha curcas]
3 Hb_002641_120 0.1188732508 - - PREDICTED: calmodulin [Jatropha curcas]
4 Hb_003299_020 0.1417485501 - - PREDICTED: uncharacterized protein LOC105649783 [Jatropha curcas]
5 Hb_008747_010 0.146693258 - - PREDICTED: protein argonaute 2-like isoform X1 [Jatropha curcas]
6 Hb_000011_560 0.1499865788 - - PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Jatropha curcas]
7 Hb_000310_060 0.1502177141 - - hypothetical protein JCGZ_20793 [Jatropha curcas]
8 Hb_005545_020 0.1542698622 - - endo beta n-acetylglucosaminidase, putative [Ricinus communis]
9 Hb_112064_010 0.1569565892 - - PREDICTED: inositol-phosphate phosphatase [Jatropha curcas]
10 Hb_003050_360 0.1598125405 - - PREDICTED: tobamovirus multiplication protein 1 isoform X2 [Jatropha curcas]
11 Hb_005527_060 0.1613621043 - - malic enzyme, putative [Ricinus communis]
12 Hb_001377_530 0.1631024357 - - NC domain-containing family protein [Populus trichocarpa]
13 Hb_001863_180 0.1634872812 - - PREDICTED: serine/threonine-protein kinase SAPK2 isoform X1 [Jatropha curcas]
14 Hb_000009_420 0.1683405465 - - PREDICTED: uncharacterized protein LOC105639614 isoform X2 [Jatropha curcas]
15 Hb_003398_040 0.168798002 - - PREDICTED: actin-related protein 5 isoform X1 [Jatropha curcas]
16 Hb_002942_140 0.1695813463 - - PREDICTED: dual specificity protein phosphatase PHS1 [Jatropha curcas]
17 Hb_002391_320 0.171757551 - - PREDICTED: phospholipase D delta-like [Jatropha curcas]
18 Hb_001754_120 0.1734643568 - - PREDICTED: probable protein phosphatase 2C 40 [Jatropha curcas]
19 Hb_002686_160 0.1747772777 transcription factor TF Family: C2C2-GATA PREDICTED: GATA transcription factor 12-like [Populus euphratica]
20 Hb_001775_120 0.175485281 - - PREDICTED: nucleobase-ascorbate transporter 12 [Jatropha curcas]

Gene co-expression network

sample Hb_000186_030 Hb_000186_030 Hb_000753_110 Hb_000753_110 Hb_000186_030--Hb_000753_110 Hb_002641_120 Hb_002641_120 Hb_000186_030--Hb_002641_120 Hb_003299_020 Hb_003299_020 Hb_000186_030--Hb_003299_020 Hb_008747_010 Hb_008747_010 Hb_000186_030--Hb_008747_010 Hb_000011_560 Hb_000011_560 Hb_000186_030--Hb_000011_560 Hb_000310_060 Hb_000310_060 Hb_000186_030--Hb_000310_060 Hb_000753_110--Hb_003299_020 Hb_000753_110--Hb_002641_120 Hb_000753_110--Hb_000310_060 Hb_000009_420 Hb_000009_420 Hb_000753_110--Hb_000009_420 Hb_003398_040 Hb_003398_040 Hb_000753_110--Hb_003398_040 Hb_002641_120--Hb_000310_060 Hb_001377_530 Hb_001377_530 Hb_002641_120--Hb_001377_530 Hb_002641_120--Hb_003398_040 Hb_002701_070 Hb_002701_070 Hb_002641_120--Hb_002701_070 Hb_001433_150 Hb_001433_150 Hb_002641_120--Hb_001433_150 Hb_005545_020 Hb_005545_020 Hb_003299_020--Hb_005545_020 Hb_010672_050 Hb_010672_050 Hb_003299_020--Hb_010672_050 Hb_003299_020--Hb_001377_530 Hb_003299_020--Hb_000009_420 Hb_003299_020--Hb_003398_040 Hb_012423_060 Hb_012423_060 Hb_008747_010--Hb_012423_060 Hb_008747_010--Hb_000753_110 Hb_008747_010--Hb_003299_020 Hb_008747_010--Hb_005545_020 Hb_005622_020 Hb_005622_020 Hb_008747_010--Hb_005622_020 Hb_004545_120 Hb_004545_120 Hb_000011_560--Hb_004545_120 Hb_000011_560--Hb_000310_060 Hb_001587_040 Hb_001587_040 Hb_000011_560--Hb_001587_040 Hb_000327_200 Hb_000327_200 Hb_000011_560--Hb_000327_200 Hb_005527_060 Hb_005527_060 Hb_000011_560--Hb_005527_060 Hb_003664_030 Hb_003664_030 Hb_000011_560--Hb_003664_030 Hb_000270_280 Hb_000270_280 Hb_000310_060--Hb_000270_280 Hb_000310_060--Hb_003398_040 Hb_000310_060--Hb_001587_040 Hb_000940_030 Hb_000940_030 Hb_000310_060--Hb_000940_030 Hb_000310_060--Hb_000327_200 Hb_000310_060--Hb_005527_060
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.339645 1.40415 4.48095 2.1364 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.200705 0.355173 0.799439 1.53911 2.74649

CAGE analysis