Hb_000039_170

Information

Type -
Description -
Location Contig39: 202198-203297
Sequence    

Annotation

kegg
ID rcu:RCOM_1096410
description phosphatidylethanolamine-binding protein, putative
nr
ID NP_001295625.1
description protein MOTHER of FT and TF 1-like [Jatropha curcas]
swissprot
ID Q9XFK7
description Protein MOTHER of FT and TF 1 OS=Arabidopsis thaliana GN=MFT PE=1 SV=1
trembl
ID A0A067JAS8
description Mother of FT and TFL1 2 OS=Jatropha curcas GN=MFT2 PE=2 SV=1
Gene Ontology
ID GO:0003712
description protein mother of ft and tf 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_39061: 202141-202973
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000039_170 0.0 - - protein MOTHER of FT and TF 1-like [Jatropha curcas]
2 Hb_000454_110 0.1416906859 - - PREDICTED: polyprenol reductase 2-like isoform X3 [Populus euphratica]
3 Hb_001723_080 0.1515817254 - - hypothetical protein L484_026139 [Morus notabilis]
4 Hb_012395_200 0.1541272418 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000847_140 0.1691861955 - - -
6 Hb_012305_120 0.1691873503 - - PREDICTED: 60S ribosomal protein L29-1-like [Glycine max]
7 Hb_003349_070 0.1754177726 - - PREDICTED: signal recognition particle 14 kDa protein [Gossypium raimondii]
8 Hb_008699_040 0.1815996325 - - -
9 Hb_008705_090 0.1832456018 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-2-like [Jatropha curcas]
10 Hb_004474_010 0.1857525917 - - unnamed protein product [Coffea canephora]
11 Hb_001012_040 0.1877030302 - - PREDICTED: MADS-box transcription factor 23-like isoform X2 [Jatropha curcas]
12 Hb_004333_030 0.1885677532 - - PREDICTED: vacuolar protein sorting-associated protein 26A [Jatropha curcas]
13 Hb_001623_430 0.1923943853 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
14 Hb_002471_160 0.1926057403 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 4-like [Populus euphratica]
15 Hb_075653_020 0.1931181081 - - -
16 Hb_030565_040 0.1950756219 - - glycine-rich RNA-binding protein, putative [Ricinus communis]
17 Hb_030954_020 0.1951686557 - - hypothetical protein RCOM_1330200 [Ricinus communis]
18 Hb_000684_160 0.1977704982 - - PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Jatropha curcas]
19 Hb_001473_120 0.202232288 - - Uncharacterized protein isoform 1 [Theobroma cacao]
20 Hb_000085_330 0.2036617191 - - PREDICTED: 40S ribosomal protein S8 [Jatropha curcas]

Gene co-expression network

sample Hb_000039_170 Hb_000039_170 Hb_000454_110 Hb_000454_110 Hb_000039_170--Hb_000454_110 Hb_001723_080 Hb_001723_080 Hb_000039_170--Hb_001723_080 Hb_012395_200 Hb_012395_200 Hb_000039_170--Hb_012395_200 Hb_000847_140 Hb_000847_140 Hb_000039_170--Hb_000847_140 Hb_012305_120 Hb_012305_120 Hb_000039_170--Hb_012305_120 Hb_003349_070 Hb_003349_070 Hb_000039_170--Hb_003349_070 Hb_000454_110--Hb_001723_080 Hb_001012_040 Hb_001012_040 Hb_000454_110--Hb_001012_040 Hb_103752_010 Hb_103752_010 Hb_000454_110--Hb_103752_010 Hb_149683_010 Hb_149683_010 Hb_000454_110--Hb_149683_010 Hb_000454_110--Hb_012395_200 Hb_001723_080--Hb_001012_040 Hb_000300_400 Hb_000300_400 Hb_001723_080--Hb_000300_400 Hb_008705_090 Hb_008705_090 Hb_001723_080--Hb_008705_090 Hb_001723_080--Hb_012395_200 Hb_012395_210 Hb_012395_210 Hb_001723_080--Hb_012395_210 Hb_000684_160 Hb_000684_160 Hb_012395_200--Hb_000684_160 Hb_001008_010 Hb_001008_010 Hb_012395_200--Hb_001008_010 Hb_000078_010 Hb_000078_010 Hb_012395_200--Hb_000078_010 Hb_007810_030 Hb_007810_030 Hb_012395_200--Hb_007810_030 Hb_074590_010 Hb_074590_010 Hb_012395_200--Hb_074590_010 Hb_000847_140--Hb_012305_120 Hb_008699_040 Hb_008699_040 Hb_000847_140--Hb_008699_040 Hb_015978_070 Hb_015978_070 Hb_000847_140--Hb_015978_070 Hb_004474_010 Hb_004474_010 Hb_000847_140--Hb_004474_010 Hb_001623_430 Hb_001623_430 Hb_000847_140--Hb_001623_430 Hb_012305_120--Hb_015978_070 Hb_000345_430 Hb_000345_430 Hb_012305_120--Hb_000345_430 Hb_012305_120--Hb_001623_430 Hb_007520_060 Hb_007520_060 Hb_012305_120--Hb_007520_060 Hb_009659_020 Hb_009659_020 Hb_012305_120--Hb_009659_020 Hb_003349_070--Hb_001623_430 Hb_004223_260 Hb_004223_260 Hb_003349_070--Hb_004223_260 Hb_000106_100 Hb_000106_100 Hb_003349_070--Hb_000106_100 Hb_000819_070 Hb_000819_070 Hb_003349_070--Hb_000819_070 Hb_000085_330 Hb_000085_330 Hb_003349_070--Hb_000085_330 Hb_183086_040 Hb_183086_040 Hb_003349_070--Hb_183086_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.27124 4.13033 0.499575 0.595065 1.20938 24.8415
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
34.5293 47.5672 17.736 6.60366 0

CAGE analysis