Hb_000018_130

Information

Type -
Description -
Location Contig18: 169364-173679
Sequence    

Annotation

kegg
ID cit:102613371
description probable lactoylglutathione lyase, chloroplast-like
nr
ID XP_012077408.1
description PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
swissprot
ID Q8W593
description Probable lactoylglutathione lyase, chloroplast OS=Arabidopsis thaliana GN=At1g67280 PE=1 SV=1
trembl
ID A0A067KDJ8
description Lactoylglutathione lyase OS=Jatropha curcas GN=JCGZ_07758 PE=3 SV=1
Gene Ontology
ID GO:0009570
description probable lactoylglutathione chloroplast

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_17425: 171182-173299 , PASA_asmbl_17427: 173300-174499
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000018_130 0.0 - - PREDICTED: probable lactoylglutathione lyase, chloroplast isoform X1 [Jatropha curcas]
2 Hb_000858_050 0.1121723483 - - kinase, putative [Ricinus communis]
3 Hb_004146_030 0.1333808321 - - UDP-glucosyltransferase, putative [Ricinus communis]
4 Hb_005029_030 0.1411159763 - - PREDICTED: LOW QUALITY PROTEIN: 36.4 kDa proline-rich protein-like [Sesamum indicum]
5 Hb_000026_060 0.1417312379 - - beta-1,3-glucanase [Manihot esculenta]
6 Hb_106552_030 0.1425215217 - - hypothetical protein POPTR_0006s23180g [Populus trichocarpa]
7 Hb_004010_080 0.1469897429 - - alcohol dehydrogenase, putative [Ricinus communis]
8 Hb_080791_010 0.1471200723 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
9 Hb_002041_020 0.1490014743 - - PREDICTED: uncharacterized protein At4g06744-like [Jatropha curcas]
10 Hb_007122_010 0.1519909071 - - hypothetical protein JCGZ_21227 [Jatropha curcas]
11 Hb_015807_020 0.1530811614 - - gibberellin 20-oxidase, putative [Ricinus communis]
12 Hb_000476_030 0.1534894496 - - PREDICTED: uncharacterized protein LOC105629366 [Jatropha curcas]
13 Hb_002027_420 0.1541433054 - - hypothetical protein POPTR_0020s00240g [Populus trichocarpa]
14 Hb_000282_100 0.15621486 - - PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Jatropha curcas]
15 Hb_007426_070 0.1585266927 - - PREDICTED: peroxisomal (S)-2-hydroxy-acid oxidase [Jatropha curcas]
16 Hb_000135_080 0.1603090721 - - Flavonol synthase/flavanone 3-hydroxylase, putative [Ricinus communis]
17 Hb_168319_040 0.1615037025 - - PREDICTED: cytochrome P450 CYP749A22-like [Jatropha curcas]
18 Hb_015817_010 0.1621260615 - - PREDICTED: putative receptor protein kinase ZmPK1 [Jatropha curcas]
19 Hb_001584_050 0.1646084997 - - PREDICTED: NHL repeat-containing protein 2 isoform X1 [Jatropha curcas]
20 Hb_000107_540 0.1646597059 - - PREDICTED: uncharacterized protein LOC105635335 [Jatropha curcas]

Gene co-expression network

sample Hb_000018_130 Hb_000018_130 Hb_000858_050 Hb_000858_050 Hb_000018_130--Hb_000858_050 Hb_004146_030 Hb_004146_030 Hb_000018_130--Hb_004146_030 Hb_005029_030 Hb_005029_030 Hb_000018_130--Hb_005029_030 Hb_000026_060 Hb_000026_060 Hb_000018_130--Hb_000026_060 Hb_106552_030 Hb_106552_030 Hb_000018_130--Hb_106552_030 Hb_004010_080 Hb_004010_080 Hb_000018_130--Hb_004010_080 Hb_015807_020 Hb_015807_020 Hb_000858_050--Hb_015807_020 Hb_000282_100 Hb_000282_100 Hb_000858_050--Hb_000282_100 Hb_000858_050--Hb_000026_060 Hb_000858_050--Hb_004146_030 Hb_000858_050--Hb_005029_030 Hb_001289_050 Hb_001289_050 Hb_000858_050--Hb_001289_050 Hb_007426_070 Hb_007426_070 Hb_004146_030--Hb_007426_070 Hb_004146_030--Hb_000026_060 Hb_000017_210 Hb_000017_210 Hb_004146_030--Hb_000017_210 Hb_000483_440 Hb_000483_440 Hb_004146_030--Hb_000483_440 Hb_001579_050 Hb_001579_050 Hb_004146_030--Hb_001579_050 Hb_015817_010 Hb_015817_010 Hb_005029_030--Hb_015817_010 Hb_000270_040 Hb_000270_040 Hb_005029_030--Hb_000270_040 Hb_080791_010 Hb_080791_010 Hb_005029_030--Hb_080791_010 Hb_000476_030 Hb_000476_030 Hb_005029_030--Hb_000476_030 Hb_000135_080 Hb_000135_080 Hb_005029_030--Hb_000135_080 Hb_000026_060--Hb_080791_010 Hb_003171_040 Hb_003171_040 Hb_000026_060--Hb_003171_040 Hb_000026_060--Hb_015817_010 Hb_000026_060--Hb_007426_070 Hb_156850_020 Hb_156850_020 Hb_106552_030--Hb_156850_020 Hb_010080_070 Hb_010080_070 Hb_106552_030--Hb_010080_070 Hb_000992_090 Hb_000992_090 Hb_106552_030--Hb_000992_090 Hb_012940_020 Hb_012940_020 Hb_106552_030--Hb_012940_020 Hb_068804_110 Hb_068804_110 Hb_106552_030--Hb_068804_110 Hb_000360_010 Hb_000360_010 Hb_106552_030--Hb_000360_010 Hb_004010_080--Hb_000858_050 Hb_001001_130 Hb_001001_130 Hb_004010_080--Hb_001001_130 Hb_004010_080--Hb_000270_040 Hb_004010_080--Hb_000282_100 Hb_004010_080--Hb_015807_020 Hb_004010_080--Hb_005029_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.440797 4.76965 0.714335 0.156277 0.0276816
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.35946 0.131986 0 1.44104 19.7321

CAGE analysis