Hb_165404_020

Information

Type -
Description -
Location Contig165404: 4577-5080
Sequence    

Annotation

kegg
ID rcu:RCOM_0024090
description enzyme inhibitor, putative
nr
ID KDP26631.1
description hypothetical protein JCGZ_17789 [Jatropha curcas]
swissprot
ID O23447
description Putative pectinesterase/pectinesterase inhibitor 43 OS=Arabidopsis thaliana GN=PME43 PE=2 SV=1
trembl
ID A0A067JRQ1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17789 PE=4 SV=1
Gene Ontology
ID GO:0004857
description pectinesterase inhibitor-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_165404_020 0.0 - - hypothetical protein JCGZ_17789 [Jatropha curcas]
2 Hb_000802_100 0.1377828219 - - PREDICTED: uncharacterized protein LOC105634009 [Jatropha curcas]
3 Hb_029866_020 0.1431197726 - - PREDICTED: mitochondrial carrier protein MTM1 [Jatropha curcas]
4 Hb_003077_040 0.1447207272 - - PREDICTED: probable E3 ubiquitin-protein ligase HIP1 [Jatropha curcas]
5 Hb_005731_170 0.1466489961 - - hypothetical protein PRUPE_ppa011750mg [Prunus persica]
6 Hb_001160_030 0.1482763857 transcription factor TF Family: Alfin-like hypothetical protein POPTR_0018s05470g [Populus trichocarpa]
7 Hb_020301_040 0.1532920436 - - PREDICTED: mitochondrial substrate carrier family protein P [Jatropha curcas]
8 Hb_001396_100 0.153948719 - - DNA binding protein, putative [Ricinus communis]
9 Hb_001279_340 0.1563772619 - - glycerol-3-phosphate dehydrogenase [Jatropha curcas]
10 Hb_002876_120 0.1573230422 - - PREDICTED: protein-tyrosine-phosphatase PTP1 isoform X1 [Jatropha curcas]
11 Hb_000627_120 0.1591404499 - - PREDICTED: probable adenylate kinase 7, mitochondrial [Jatropha curcas]
12 Hb_000141_020 0.1606460766 transcription factor TF Family: GRAS PREDICTED: scarecrow-like protein 6 [Pyrus x bretschneideri]
13 Hb_004668_020 0.1622494565 - - PREDICTED: uncharacterized protein LOC105630444 isoform X2 [Jatropha curcas]
14 Hb_021409_030 0.1636442609 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X3 [Jatropha curcas]
15 Hb_003581_150 0.1636969323 - - hypothetical protein CICLE_v10032366mg [Citrus clementina]
16 Hb_000805_250 0.1637704377 - - PREDICTED: rhomboid-like protease 2 [Jatropha curcas]
17 Hb_003376_030 0.1641325624 - - PREDICTED: ribonuclease P protein subunit p29 isoform X2 [Jatropha curcas]
18 Hb_001633_170 0.1646535448 - - PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Jatropha curcas]
19 Hb_001314_040 0.1649504055 - - hypothetical protein POPTR_0011s10470g [Populus trichocarpa]
20 Hb_006831_120 0.1650291775 - - PREDICTED: uncharacterized protein LOC105642121 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_165404_020 Hb_165404_020 Hb_000802_100 Hb_000802_100 Hb_165404_020--Hb_000802_100 Hb_029866_020 Hb_029866_020 Hb_165404_020--Hb_029866_020 Hb_003077_040 Hb_003077_040 Hb_165404_020--Hb_003077_040 Hb_005731_170 Hb_005731_170 Hb_165404_020--Hb_005731_170 Hb_001160_030 Hb_001160_030 Hb_165404_020--Hb_001160_030 Hb_020301_040 Hb_020301_040 Hb_165404_020--Hb_020301_040 Hb_001314_040 Hb_001314_040 Hb_000802_100--Hb_001314_040 Hb_002876_120 Hb_002876_120 Hb_000802_100--Hb_002876_120 Hb_001157_010 Hb_001157_010 Hb_000802_100--Hb_001157_010 Hb_000530_070 Hb_000530_070 Hb_000802_100--Hb_000530_070 Hb_003579_030 Hb_003579_030 Hb_000802_100--Hb_003579_030 Hb_003581_260 Hb_003581_260 Hb_000802_100--Hb_003581_260 Hb_000347_410 Hb_000347_410 Hb_029866_020--Hb_000347_410 Hb_001396_100 Hb_001396_100 Hb_029866_020--Hb_001396_100 Hb_000240_090 Hb_000240_090 Hb_029866_020--Hb_000240_090 Hb_029866_020--Hb_005731_170 Hb_011953_020 Hb_011953_020 Hb_029866_020--Hb_011953_020 Hb_007943_090 Hb_007943_090 Hb_029866_020--Hb_007943_090 Hb_001484_070 Hb_001484_070 Hb_003077_040--Hb_001484_070 Hb_000103_010 Hb_000103_010 Hb_003077_040--Hb_000103_010 Hb_001085_120 Hb_001085_120 Hb_003077_040--Hb_001085_120 Hb_000261_140 Hb_000261_140 Hb_003077_040--Hb_000261_140 Hb_000086_280 Hb_000086_280 Hb_003077_040--Hb_000086_280 Hb_000453_120 Hb_000453_120 Hb_003077_040--Hb_000453_120 Hb_003455_040 Hb_003455_040 Hb_005731_170--Hb_003455_040 Hb_001998_050 Hb_001998_050 Hb_005731_170--Hb_001998_050 Hb_002374_390 Hb_002374_390 Hb_005731_170--Hb_002374_390 Hb_148200_010 Hb_148200_010 Hb_005731_170--Hb_148200_010 Hb_003376_030 Hb_003376_030 Hb_005731_170--Hb_003376_030 Hb_001829_060 Hb_001829_060 Hb_005731_170--Hb_001829_060 Hb_001160_030--Hb_003376_030 Hb_002097_060 Hb_002097_060 Hb_001160_030--Hb_002097_060 Hb_001616_060 Hb_001616_060 Hb_001160_030--Hb_001616_060 Hb_001575_020 Hb_001575_020 Hb_001160_030--Hb_001575_020 Hb_000146_020 Hb_000146_020 Hb_001160_030--Hb_000146_020 Hb_001616_030 Hb_001616_030 Hb_001160_030--Hb_001616_030 Hb_020301_040--Hb_002876_120 Hb_020301_040--Hb_003579_030 Hb_000975_300 Hb_000975_300 Hb_020301_040--Hb_000975_300 Hb_007594_120 Hb_007594_120 Hb_020301_040--Hb_007594_120 Hb_004375_140 Hb_004375_140 Hb_020301_040--Hb_004375_140 Hb_021409_030 Hb_021409_030 Hb_020301_040--Hb_021409_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.217389 0.273008 0.720187 0.255193 0.391882 0.713713
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.4572 1.35296 1.76599 0.216165 0.194905

CAGE analysis