Hb_021409_030

Information

Type -
Description -
Location Contig21409: 9751-13102
Sequence    

Annotation

kegg
ID rcu:RCOM_1312940
description kinase, putative (EC:2.7.11.25)
nr
ID XP_012086649.1
description PREDICTED: serine/threonine-protein kinase WNK8 isoform X3 [Jatropha curcas]
swissprot
ID Q944Q0
description Serine/threonine-protein kinase WNK8 OS=Arabidopsis thaliana GN=WNK8 PE=1 SV=1
trembl
ID A0A067JZ30
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20391 PE=4 SV=1
Gene Ontology
ID GO:0005622
description kinase family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_22108: 10645-10833 , PASA_asmbl_22109: 12468-12614 , PASA_asmbl_22110: 12510-12884
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_021409_030 0.0 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X3 [Jatropha curcas]
2 Hb_129204_030 0.0662089948 - - PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Jatropha curcas]
3 Hb_004375_140 0.0672522898 - - PREDICTED: nicotinamide adenine dinucleotide transporter 1, chloroplastic [Jatropha curcas]
4 Hb_138585_060 0.0721452162 - - PREDICTED: uncharacterized protein LOC105648743 [Jatropha curcas]
5 Hb_000608_370 0.0732384333 - - acyl-carrier-protein [Triadica sebifera]
6 Hb_000240_090 0.0742682107 - - Rab5 [Hevea brasiliensis]
7 Hb_012753_160 0.0765481144 - - ara4-interacting protein, putative [Ricinus communis]
8 Hb_000120_680 0.0790995262 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
9 Hb_000563_250 0.0799548786 - - PREDICTED: uncharacterized protein LOC105643472 [Jatropha curcas]
10 Hb_000072_080 0.0814807291 - - PREDICTED: probable ribosomal protein S11, mitochondrial [Jatropha curcas]
11 Hb_000377_060 0.0830132229 - - ARF GTPase activator, putative [Ricinus communis]
12 Hb_000258_170 0.0837371843 - - PREDICTED: uncharacterized protein LOC105630437 [Jatropha curcas]
13 Hb_000086_280 0.0844201958 - - PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3-like [Gossypium raimondii]
14 Hb_007943_090 0.0847848981 - - PREDICTED: probable plastidic glucose transporter 2 [Jatropha curcas]
15 Hb_000175_060 0.0857374526 - - PREDICTED: uncharacterized protein LOC105634837 [Jatropha curcas]
16 Hb_004586_320 0.0883969061 - - PREDICTED: bet1-like protein At4g14600 [Jatropha curcas]
17 Hb_001047_230 0.0884954878 - - WD-repeat protein, putative [Ricinus communis]
18 Hb_002056_060 0.0885240831 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
19 Hb_000479_010 0.089765459 - - PREDICTED: 40S ribosomal protein S19-3-like [Eucalyptus grandis]
20 Hb_011173_050 0.0898362757 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]

Gene co-expression network

sample Hb_021409_030 Hb_021409_030 Hb_129204_030 Hb_129204_030 Hb_021409_030--Hb_129204_030 Hb_004375_140 Hb_004375_140 Hb_021409_030--Hb_004375_140 Hb_138585_060 Hb_138585_060 Hb_021409_030--Hb_138585_060 Hb_000608_370 Hb_000608_370 Hb_021409_030--Hb_000608_370 Hb_000240_090 Hb_000240_090 Hb_021409_030--Hb_000240_090 Hb_012753_160 Hb_012753_160 Hb_021409_030--Hb_012753_160 Hb_129204_030--Hb_000608_370 Hb_000167_140 Hb_000167_140 Hb_129204_030--Hb_000167_140 Hb_001047_230 Hb_001047_230 Hb_129204_030--Hb_001047_230 Hb_129204_030--Hb_000240_090 Hb_001277_070 Hb_001277_070 Hb_129204_030--Hb_001277_070 Hb_000103_010 Hb_000103_010 Hb_004375_140--Hb_000103_010 Hb_001085_120 Hb_001085_120 Hb_004375_140--Hb_001085_120 Hb_004375_140--Hb_129204_030 Hb_004586_320 Hb_004586_320 Hb_004375_140--Hb_004586_320 Hb_004375_140--Hb_000608_370 Hb_000072_080 Hb_000072_080 Hb_138585_060--Hb_000072_080 Hb_000258_170 Hb_000258_170 Hb_138585_060--Hb_000258_170 Hb_001141_030 Hb_001141_030 Hb_138585_060--Hb_001141_030 Hb_007100_030 Hb_007100_030 Hb_138585_060--Hb_007100_030 Hb_000479_010 Hb_000479_010 Hb_138585_060--Hb_000479_010 Hb_007416_030 Hb_007416_030 Hb_000608_370--Hb_007416_030 Hb_000608_370--Hb_001047_230 Hb_000788_090 Hb_000788_090 Hb_000608_370--Hb_000788_090 Hb_000608_370--Hb_000258_170 Hb_002454_030 Hb_002454_030 Hb_000608_370--Hb_002454_030 Hb_000120_680 Hb_000120_680 Hb_000240_090--Hb_000120_680 Hb_004635_100 Hb_004635_100 Hb_000240_090--Hb_004635_100 Hb_000347_410 Hb_000347_410 Hb_000240_090--Hb_000347_410 Hb_029866_020 Hb_029866_020 Hb_000240_090--Hb_029866_020 Hb_012675_060 Hb_012675_060 Hb_012753_160--Hb_012675_060 Hb_001140_060 Hb_001140_060 Hb_012753_160--Hb_001140_060 Hb_012753_160--Hb_000072_080 Hb_001998_050 Hb_001998_050 Hb_012753_160--Hb_001998_050 Hb_003455_040 Hb_003455_040 Hb_012753_160--Hb_003455_040 Hb_000574_480 Hb_000574_480 Hb_012753_160--Hb_000574_480
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.23896 5.46145 6.12878 5.26257 7.72594 8.56722
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
12.6729 23.6091 21.0598 5.04938 3.98391

CAGE analysis