Hb_000120_680

Information

Type -
Description -
Location Contig120: 538515-539705
Sequence    

Annotation

kegg
ID rcu:RCOM_0874600
description hypothetical protein
nr
ID XP_012065406.1
description PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L991
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_22400 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_000120_680 0.0 - - PREDICTED: uncharacterized protein LOC105628572 [Jatropha curcas]
2 Hb_000617_150 0.0504576316 - - PREDICTED: pentatricopeptide repeat-containing protein At3g61360-like [Jatropha curcas]
3 Hb_000240_090 0.0545073986 - - Rab5 [Hevea brasiliensis]
4 Hb_004635_100 0.0711388534 - - PREDICTED: L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase isoform X1 [Jatropha curcas]
5 Hb_000563_250 0.0739907412 - - PREDICTED: uncharacterized protein LOC105643472 [Jatropha curcas]
6 Hb_001699_130 0.0746610727 transcription factor TF Family: CSD PREDICTED: cold shock domain-containing protein 3 [Jatropha curcas]
7 Hb_000622_090 0.0786102577 - - PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 [Jatropha curcas]
8 Hb_021409_030 0.0790995262 - - PREDICTED: serine/threonine-protein kinase WNK8 isoform X3 [Jatropha curcas]
9 Hb_001059_030 0.0835687488 - - PREDICTED: F-box protein At5g03100-like [Solanum lycopersicum]
10 Hb_000072_080 0.0840250183 - - PREDICTED: probable ribosomal protein S11, mitochondrial [Jatropha curcas]
11 Hb_008695_100 0.0846941574 - - PREDICTED: mediator of RNA polymerase II transcription subunit 1 isoform X2 [Jatropha curcas]
12 Hb_002056_060 0.0854935323 - - Protein kinase APK1A, chloroplast precursor, putative [Ricinus communis]
13 Hb_009486_130 0.0873234778 - - hypothetical protein CISIN_1g023046mg [Citrus sinensis]
14 Hb_000347_410 0.0876470629 - - PREDICTED: transcription initiation factor TFIID subunit 9 [Jatropha curcas]
15 Hb_012675_060 0.087984519 - - hypothetical protein PRUPE_ppa007715mg [Prunus persica]
16 Hb_010422_060 0.0882768882 - - PREDICTED: GLABRA2 expression modulator [Jatropha curcas]
17 Hb_012753_160 0.0883506879 - - ara4-interacting protein, putative [Ricinus communis]
18 Hb_011173_050 0.0884170671 - - PREDICTED: OTU domain-containing protein DDB_G0284757 [Jatropha curcas]
19 Hb_000696_040 0.089715504 - - protein phosphatase 2c, putative [Ricinus communis]
20 Hb_000009_160 0.0909535708 - - RUB1 conjugating enzyme 1 isoform 2 [Theobroma cacao]

Gene co-expression network

sample Hb_000120_680 Hb_000120_680 Hb_000617_150 Hb_000617_150 Hb_000120_680--Hb_000617_150 Hb_000240_090 Hb_000240_090 Hb_000120_680--Hb_000240_090 Hb_004635_100 Hb_004635_100 Hb_000120_680--Hb_004635_100 Hb_000563_250 Hb_000563_250 Hb_000120_680--Hb_000563_250 Hb_001699_130 Hb_001699_130 Hb_000120_680--Hb_001699_130 Hb_000622_090 Hb_000622_090 Hb_000120_680--Hb_000622_090 Hb_000617_150--Hb_001699_130 Hb_172932_010 Hb_172932_010 Hb_000617_150--Hb_172932_010 Hb_011534_030 Hb_011534_030 Hb_000617_150--Hb_011534_030 Hb_001454_190 Hb_001454_190 Hb_000617_150--Hb_001454_190 Hb_008695_100 Hb_008695_100 Hb_000617_150--Hb_008695_100 Hb_000240_090--Hb_004635_100 Hb_129204_030 Hb_129204_030 Hb_000240_090--Hb_129204_030 Hb_000347_410 Hb_000347_410 Hb_000240_090--Hb_000347_410 Hb_029866_020 Hb_029866_020 Hb_000240_090--Hb_029866_020 Hb_021409_030 Hb_021409_030 Hb_000240_090--Hb_021409_030 Hb_001059_030 Hb_001059_030 Hb_004635_100--Hb_001059_030 Hb_000915_090 Hb_000915_090 Hb_004635_100--Hb_000915_090 Hb_029879_130 Hb_029879_130 Hb_004635_100--Hb_029879_130 Hb_000676_180 Hb_000676_180 Hb_004635_100--Hb_000676_180 Hb_001616_030 Hb_001616_030 Hb_000563_250--Hb_001616_030 Hb_000563_250--Hb_000240_090 Hb_000563_250--Hb_021409_030 Hb_000086_280 Hb_000086_280 Hb_000563_250--Hb_000086_280 Hb_021409_160 Hb_021409_160 Hb_000563_250--Hb_021409_160 Hb_000696_040 Hb_000696_040 Hb_001699_130--Hb_000696_040 Hb_000723_080 Hb_000723_080 Hb_001699_130--Hb_000723_080 Hb_010608_050 Hb_010608_050 Hb_001699_130--Hb_010608_050 Hb_016901_010 Hb_016901_010 Hb_001699_130--Hb_016901_010 Hb_000622_090--Hb_000240_090 Hb_000622_090--Hb_021409_160 Hb_004994_100 Hb_004994_100 Hb_000622_090--Hb_004994_100 Hb_000622_090--Hb_000563_250 Hb_004126_070 Hb_004126_070 Hb_000622_090--Hb_004126_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.8751 17.4166 12.5158 16.3369 27.363 22.3767
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
42.2478 55.1945 62.636 16.5528 18.7857

CAGE analysis