Hb_148209_100

Information

Type -
Description -
Location Contig148209: 77880-83208
Sequence    

Annotation

kegg
ID rcu:RCOM_0937410
description phosphatidylinositol 4-kinase, putative (EC:2.7.1.67)
nr
ID XP_002519082.1
description phosphatidylinositol 4-kinase, putative [Ricinus communis]
swissprot
ID Q9SXA1
description Phosphatidylinositol 4-kinase alpha 1 OS=Arabidopsis thaliana GN=PI4KA1 PE=1 SV=2
trembl
ID B9RZB3
description Phosphatidylinositol 4-kinase, putative OS=Ricinus communis GN=RCOM_0937410 PE=4 SV=1
Gene Ontology
ID GO:0046854
description phosphatidylinositol 4-kinase alpha 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_12160: 79145-80587
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_148209_100 0.0 - - phosphatidylinositol 4-kinase, putative [Ricinus communis]
2 Hb_001450_050 0.0973973553 - - conserved hypothetical protein [Ricinus communis]
3 Hb_002998_060 0.1055565988 - - PREDICTED: vacuolar protein-sorting-associated protein 33 homolog [Jatropha curcas]
4 Hb_011671_240 0.1085557862 - - PREDICTED: WD repeat-containing protein WRAP73-like [Jatropha curcas]
5 Hb_001632_040 0.113106827 - - PREDICTED: transmembrane protein adipocyte-associated 1 homolog isoform X1 [Jatropha curcas]
6 Hb_002232_100 0.1136379729 - - vacuolar ATPase F subunit [Hevea brasiliensis]
7 Hb_004369_020 0.1138815656 - - PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like [Jatropha curcas]
8 Hb_004414_060 0.1148806252 - - hypothetical protein JCGZ_17225 [Jatropha curcas]
9 Hb_181288_020 0.1162867099 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
10 Hb_004907_080 0.1165102523 - - zinc finger protein, putative [Ricinus communis]
11 Hb_013726_020 0.1216121778 - - ara4-interacting protein, putative [Ricinus communis]
12 Hb_003683_160 0.1218251473 - - PREDICTED: uncharacterized protein LOC105650622 [Jatropha curcas]
13 Hb_000330_100 0.1222810632 - - hypothetical protein VITISV_011650 [Vitis vinifera]
14 Hb_000025_030 0.1227210734 - - transcription factor, putative [Ricinus communis]
15 Hb_007594_030 0.1240042023 - - PREDICTED: cucumber peeling cupredoxin-like [Jatropha curcas]
16 Hb_002749_090 0.1249872882 - - -
17 Hb_000451_010 0.127649135 - - secretory carrier membrane protein, putative [Ricinus communis]
18 Hb_003417_020 0.130370347 - - PREDICTED: 50S ribosomal protein L13, chloroplastic [Jatropha curcas]
19 Hb_003470_090 0.1317325948 - - PREDICTED: pumilio homolog 12 [Jatropha curcas]
20 Hb_000300_160 0.1322754657 transcription factor TF Family: C2C2-Dof PREDICTED: cyclic dof factor 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_148209_100 Hb_148209_100 Hb_001450_050 Hb_001450_050 Hb_148209_100--Hb_001450_050 Hb_002998_060 Hb_002998_060 Hb_148209_100--Hb_002998_060 Hb_011671_240 Hb_011671_240 Hb_148209_100--Hb_011671_240 Hb_001632_040 Hb_001632_040 Hb_148209_100--Hb_001632_040 Hb_002232_100 Hb_002232_100 Hb_148209_100--Hb_002232_100 Hb_004369_020 Hb_004369_020 Hb_148209_100--Hb_004369_020 Hb_001450_050--Hb_004369_020 Hb_003728_080 Hb_003728_080 Hb_001450_050--Hb_003728_080 Hb_010139_040 Hb_010139_040 Hb_001450_050--Hb_010139_040 Hb_002835_040 Hb_002835_040 Hb_001450_050--Hb_002835_040 Hb_000330_100 Hb_000330_100 Hb_001450_050--Hb_000330_100 Hb_000046_320 Hb_000046_320 Hb_002998_060--Hb_000046_320 Hb_000656_040 Hb_000656_040 Hb_002998_060--Hb_000656_040 Hb_003177_030 Hb_003177_030 Hb_002998_060--Hb_003177_030 Hb_000050_200 Hb_000050_200 Hb_002998_060--Hb_000050_200 Hb_000019_030 Hb_000019_030 Hb_002998_060--Hb_000019_030 Hb_000096_010 Hb_000096_010 Hb_002998_060--Hb_000096_010 Hb_000451_010 Hb_000451_010 Hb_011671_240--Hb_000451_010 Hb_011671_240--Hb_000019_030 Hb_000618_040 Hb_000618_040 Hb_011671_240--Hb_000618_040 Hb_001575_090 Hb_001575_090 Hb_011671_240--Hb_001575_090 Hb_004907_080 Hb_004907_080 Hb_011671_240--Hb_004907_080 Hb_019280_040 Hb_019280_040 Hb_011671_240--Hb_019280_040 Hb_004414_060 Hb_004414_060 Hb_001632_040--Hb_004414_060 Hb_002276_170 Hb_002276_170 Hb_001632_040--Hb_002276_170 Hb_114310_090 Hb_114310_090 Hb_001632_040--Hb_114310_090 Hb_001243_040 Hb_001243_040 Hb_001632_040--Hb_001243_040 Hb_001632_040--Hb_004907_080 Hb_000342_130 Hb_000342_130 Hb_001632_040--Hb_000342_130 Hb_010457_030 Hb_010457_030 Hb_002232_100--Hb_010457_030 Hb_007904_200 Hb_007904_200 Hb_002232_100--Hb_007904_200 Hb_002232_100--Hb_011671_240 Hb_002232_100--Hb_000451_010 Hb_000010_330 Hb_000010_330 Hb_002232_100--Hb_000010_330 Hb_002506_020 Hb_002506_020 Hb_002232_100--Hb_002506_020 Hb_004369_020--Hb_003728_080 Hb_000010_090 Hb_000010_090 Hb_004369_020--Hb_000010_090 Hb_000173_290 Hb_000173_290 Hb_004369_020--Hb_000173_290 Hb_004182_040 Hb_004182_040 Hb_004369_020--Hb_004182_040 Hb_004369_020--Hb_000010_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
1.96955 0.342683 1.43005 1.63178 2.36904 1.66385
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.930259 1.67622 2.57601 1.39406 0.642995

CAGE analysis