Hb_004182_040

Information

Type -
Description -
Location Contig4182: 56816-64911
Sequence    

Annotation

kegg
ID egr:104421358
description J domain-containing protein spf31
nr
ID XP_012066344.1
description PREDICTED: J domain-containing protein spf31 [Jatropha curcas]
swissprot
ID O75937
description DnaJ homolog subfamily C member 8 OS=Homo sapiens GN=DNAJC8 PE=1 SV=2
trembl
ID A0A067L3B9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23903 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_41375: 56832-64953 , PASA_asmbl_41376: 62647-62961
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_004182_040 0.0 - - PREDICTED: J domain-containing protein spf31 [Jatropha curcas]
2 Hb_003125_160 0.0651639624 transcription factor TF Family: NF-YC PREDICTED: nuclear transcription factor Y subunit C-1 isoform X1 [Jatropha curcas]
3 Hb_000690_130 0.0761846615 - - PREDICTED: uncharacterized protein LOC105631771 [Jatropha curcas]
4 Hb_003665_060 0.0771204503 - - PREDICTED: protein N-lysine methyltransferase METTL21A [Jatropha curcas]
5 Hb_003728_080 0.0788625188 transcription factor TF Family: FAR1 PREDICTED: protein FAR-RED ELONGATED HYPOCOTYL 3-like [Jatropha curcas]
6 Hb_001350_010 0.0794354771 - - PREDICTED: uncharacterized protein LOC105629383 [Jatropha curcas]
7 Hb_000291_220 0.0797063351 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105638855 [Jatropha curcas]
8 Hb_024714_100 0.0802390444 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 isoform X1 [Jatropha curcas]
9 Hb_002805_270 0.0809495644 - - PREDICTED: phytochromobilin:ferredoxin oxidoreductase, chloroplastic isoform X1 [Jatropha curcas]
10 Hb_002391_300 0.0820700964 - - hypothetical protein PHAVU_002G104100g [Phaseolus vulgaris]
11 Hb_000058_100 0.0841238114 - - PREDICTED: RNA-directed DNA methylation 4 [Jatropha curcas]
12 Hb_000054_090 0.0844246022 - - zinc finger protein, putative [Ricinus communis]
13 Hb_028227_020 0.0844400568 - - PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB isoform X1 [Jatropha curcas]
14 Hb_003030_070 0.0854540846 - - PREDICTED: ELMO domain-containing protein A isoform X1 [Jatropha curcas]
15 Hb_000120_790 0.0868399989 - - PREDICTED: heterogeneous nuclear ribonucleoprotein H isoform X1 [Jatropha curcas]
16 Hb_000010_090 0.0880242487 - - PREDICTED: afadin- and alpha-actinin-binding protein isoform X1 [Jatropha curcas]
17 Hb_000529_190 0.0880699544 - - PREDICTED: magnesium-dependent phosphatase 1-like [Jatropha curcas]
18 Hb_000395_170 0.0885751031 - - PREDICTED: probable transcriptional regulatory protein At2g25830 [Jatropha curcas]
19 Hb_020719_030 0.0888681885 - - PREDICTED: ER membrane protein complex subunit 3-like [Jatropha curcas]
20 Hb_000023_220 0.0894794414 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 18 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_004182_040 Hb_004182_040 Hb_003125_160 Hb_003125_160 Hb_004182_040--Hb_003125_160 Hb_000690_130 Hb_000690_130 Hb_004182_040--Hb_000690_130 Hb_003665_060 Hb_003665_060 Hb_004182_040--Hb_003665_060 Hb_003728_080 Hb_003728_080 Hb_004182_040--Hb_003728_080 Hb_001350_010 Hb_001350_010 Hb_004182_040--Hb_001350_010 Hb_000291_220 Hb_000291_220 Hb_004182_040--Hb_000291_220 Hb_000230_560 Hb_000230_560 Hb_003125_160--Hb_000230_560 Hb_156973_010 Hb_156973_010 Hb_003125_160--Hb_156973_010 Hb_003125_160--Hb_003665_060 Hb_002918_030 Hb_002918_030 Hb_003125_160--Hb_002918_030 Hb_001369_180 Hb_001369_180 Hb_003125_160--Hb_001369_180 Hb_006064_010 Hb_006064_010 Hb_000690_130--Hb_006064_010 Hb_002687_130 Hb_002687_130 Hb_000690_130--Hb_002687_130 Hb_000373_240 Hb_000373_240 Hb_000690_130--Hb_000373_240 Hb_002391_300 Hb_002391_300 Hb_000690_130--Hb_002391_300 Hb_002805_270 Hb_002805_270 Hb_000690_130--Hb_002805_270 Hb_000010_330 Hb_000010_330 Hb_003665_060--Hb_000010_330 Hb_003964_070 Hb_003964_070 Hb_003665_060--Hb_003964_070 Hb_007317_110 Hb_007317_110 Hb_003665_060--Hb_007317_110 Hb_003665_060--Hb_000230_560 Hb_003030_070 Hb_003030_070 Hb_003665_060--Hb_003030_070 Hb_000085_160 Hb_000085_160 Hb_003665_060--Hb_000085_160 Hb_004369_020 Hb_004369_020 Hb_003728_080--Hb_004369_020 Hb_010139_040 Hb_010139_040 Hb_003728_080--Hb_010139_040 Hb_003728_080--Hb_006064_010 Hb_048937_040 Hb_048937_040 Hb_003728_080--Hb_048937_040 Hb_009646_030 Hb_009646_030 Hb_003728_080--Hb_009646_030 Hb_003728_080--Hb_003665_060 Hb_001350_010--Hb_003125_160 Hb_000627_030 Hb_000627_030 Hb_001350_010--Hb_000627_030 Hb_000486_010 Hb_000486_010 Hb_001350_010--Hb_000486_010 Hb_000345_170 Hb_000345_170 Hb_001350_010--Hb_000345_170 Hb_007044_080 Hb_007044_080 Hb_001350_010--Hb_007044_080 Hb_000058_100 Hb_000058_100 Hb_000291_220--Hb_000058_100 Hb_002043_190 Hb_002043_190 Hb_000291_220--Hb_002043_190 Hb_015746_010 Hb_015746_010 Hb_000291_220--Hb_015746_010 Hb_007017_030 Hb_007017_030 Hb_000291_220--Hb_007017_030 Hb_001828_190 Hb_001828_190 Hb_000291_220--Hb_001828_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
64.1131 13.8078 32.2238 38.0218 70.9376 78.4101
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
55.5875 61.1784 47.5946 41.3523 40.27

CAGE analysis