Hb_129279_020

Information

Type -
Description -
Location Contig129279: 2705-3511
Sequence    

Annotation

kegg
ID tcc:TCM_005833
description LRR and NB-ARC domains-containing disease resistance protein, putative
nr
ID XP_012065707.1
description PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
swissprot
ID Q9LRR5
description Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=3 SV=1
trembl
ID A0A067LHB7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_16891 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_129279_020 0.0 - - PREDICTED: putative disease resistance protein At3g14460 [Jatropha curcas]
2 Hb_050484_010 0.1061306885 - - unnamed protein product [Vitis vinifera]
3 Hb_002315_070 0.1204067455 - - PREDICTED: uncharacterized protein LOC105630187 [Jatropha curcas]
4 Hb_001454_340 0.1698107936 - - ATDI21 [Manihot esculenta]
5 Hb_001269_020 0.1816181525 - - PREDICTED: beta-Amyrin Synthase 2-like [Vitis vinifera]
6 Hb_033006_040 0.1971260597 - - sulfate transporter, putative [Ricinus communis]
7 Hb_006711_010 0.1992657612 - - cytoplasmic dynein light chain, putative [Ricinus communis]
8 Hb_003677_010 0.2071433592 transcription factor TF Family: SRS PREDICTED: protein SHI RELATED SEQUENCE 1 [Jatropha curcas]
9 Hb_032631_010 0.2073668674 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
10 Hb_004109_300 0.2080867198 - - hypothetical protein POPTR_0003s21800g [Populus trichocarpa]
11 Hb_000380_040 0.2085809323 - - bel1 homeotic protein, putative [Ricinus communis]
12 Hb_000236_360 0.212476708 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Prunus mume]
13 Hb_001157_150 0.2143097416 - - PREDICTED: transmembrane protein 45A-like [Jatropha curcas]
14 Hb_058116_010 0.2150246258 - - Cycloartenol synthase, putative [Ricinus communis]
15 Hb_000670_110 0.2153639482 - - l-asparaginase, putative [Ricinus communis]
16 Hb_011618_040 0.2175227594 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005653_020 0.2237843206 transcription factor TF Family: C2H2 TRANSPARENT TESTA 1 protein, putative [Ricinus communis]
18 Hb_005550_070 0.2243247717 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 75 [Populus euphratica]
19 Hb_005663_050 0.2243382327 - - amino acid transporter, putative [Ricinus communis]
20 Hb_006418_010 0.2262514188 - - PREDICTED: cytochrome P450 76A1-like [Jatropha curcas]

Gene co-expression network

sample Hb_129279_020 Hb_129279_020 Hb_050484_010 Hb_050484_010 Hb_129279_020--Hb_050484_010 Hb_002315_070 Hb_002315_070 Hb_129279_020--Hb_002315_070 Hb_001454_340 Hb_001454_340 Hb_129279_020--Hb_001454_340 Hb_001269_020 Hb_001269_020 Hb_129279_020--Hb_001269_020 Hb_033006_040 Hb_033006_040 Hb_129279_020--Hb_033006_040 Hb_006711_010 Hb_006711_010 Hb_129279_020--Hb_006711_010 Hb_000236_360 Hb_000236_360 Hb_050484_010--Hb_000236_360 Hb_050484_010--Hb_002315_070 Hb_050484_010--Hb_001454_340 Hb_004109_300 Hb_004109_300 Hb_050484_010--Hb_004109_300 Hb_001157_150 Hb_001157_150 Hb_050484_010--Hb_001157_150 Hb_002315_070--Hb_001269_020 Hb_006418_010 Hb_006418_010 Hb_002315_070--Hb_006418_010 Hb_002315_070--Hb_001157_150 Hb_002315_070--Hb_004109_300 Hb_001454_340--Hb_033006_040 Hb_001454_340--Hb_006711_010 Hb_000380_040 Hb_000380_040 Hb_001454_340--Hb_000380_040 Hb_003119_070 Hb_003119_070 Hb_001454_340--Hb_003119_070 Hb_002007_230 Hb_002007_230 Hb_001454_340--Hb_002007_230 Hb_181092_010 Hb_181092_010 Hb_001269_020--Hb_181092_010 Hb_002677_010 Hb_002677_010 Hb_001269_020--Hb_002677_010 Hb_000185_060 Hb_000185_060 Hb_001269_020--Hb_000185_060 Hb_156949_010 Hb_156949_010 Hb_001269_020--Hb_156949_010 Hb_032582_010 Hb_032582_010 Hb_001269_020--Hb_032582_010 Hb_000856_350 Hb_000856_350 Hb_001269_020--Hb_000856_350 Hb_033006_040--Hb_000380_040 Hb_009083_080 Hb_009083_080 Hb_033006_040--Hb_009083_080 Hb_033006_040--Hb_001157_150 Hb_033006_040--Hb_000185_060 Hb_000300_570 Hb_000300_570 Hb_033006_040--Hb_000300_570 Hb_006711_010--Hb_000380_040 Hb_003677_010 Hb_003677_010 Hb_006711_010--Hb_003677_010 Hb_006711_010--Hb_001269_020 Hb_058116_010 Hb_058116_010 Hb_006711_010--Hb_058116_010 Hb_006711_010--Hb_004109_300
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.433622 0 0.05363 0.0291223 0.0349715
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.052456 0 0.742903 0

CAGE analysis