Hb_123202_010

Information

Type -
Description -
Location Contig123202: 939-2458
Sequence    

Annotation

kegg
ID tcc:TCM_030081
description C-terminal cysteine residue is changed to a serine 1
nr
ID AAD33596.1
description thioredoxin h [Hevea brasiliensis]
swissprot
ID Q8LDI5
description Thioredoxin-like protein CXXS1 OS=Arabidopsis thaliana GN=CXXS1 PE=2 SV=2
trembl
ID Q9XF70
description Thioredoxin h OS=Hevea brasiliensis PE=2 SV=1
Gene Ontology
ID GO:0005829
description thioredoxin-like protein cxxs1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_123202_010 0.0 - - thioredoxin h [Hevea brasiliensis]
2 Hb_000453_260 0.1300142417 - - PREDICTED: armadillo repeat-containing protein 7 isoform X1 [Vitis vinifera]
3 Hb_010298_010 0.1622688141 - - PREDICTED: uncharacterized protein At2g02148 [Jatropha curcas]
4 Hb_000329_770 0.162949294 - - conserved hypothetical protein [Ricinus communis]
5 Hb_006602_010 0.164621753 - - PREDICTED: tobamovirus multiplication protein 3 [Jatropha curcas]
6 Hb_004735_010 0.167366132 - - PREDICTED: protein arginine N-methyltransferase PRMT10 [Vitis vinifera]
7 Hb_005965_010 0.1792160001 transcription factor TF Family: MYB-related PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
8 Hb_000491_090 0.1802125848 - - hypothetical protein B456_008G219400 [Gossypium raimondii]
9 Hb_006198_050 0.1806957913 - - protein with unknown function [Ricinus communis]
10 Hb_000976_010 0.1808003784 transcription factor TF Family: LOB PREDICTED: LOB domain-containing protein 4 [Jatropha curcas]
11 Hb_010261_020 0.1814323401 - - hypothetical protein JCGZ_17258 [Jatropha curcas]
12 Hb_001902_050 0.1836840216 transcription factor TF Family: C2H2 PREDICTED: uncharacterized protein LOC105648450 [Jatropha curcas]
13 Hb_004072_010 0.1844571304 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Jatropha curcas]
14 Hb_015057_010 0.1848078825 - - PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Jatropha curcas]
15 Hb_000347_150 0.1849341422 - - Nucleolysin TIAR [Morus notabilis]
16 Hb_005539_290 0.1874045382 - - unknown [Lotus japonicus]
17 Hb_028639_050 0.1880208857 - - Anopheles gambiae str. PEST AGAP012660-PA [Anopheles gambiae str. PEST]
18 Hb_000878_130 0.1889077747 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000027_270 0.1903121967 - - PREDICTED: zinc finger protein 6 [Jatropha curcas]
20 Hb_004242_100 0.1907825109 - - RNA binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_123202_010 Hb_123202_010 Hb_000453_260 Hb_000453_260 Hb_123202_010--Hb_000453_260 Hb_010298_010 Hb_010298_010 Hb_123202_010--Hb_010298_010 Hb_000329_770 Hb_000329_770 Hb_123202_010--Hb_000329_770 Hb_006602_010 Hb_006602_010 Hb_123202_010--Hb_006602_010 Hb_004735_010 Hb_004735_010 Hb_123202_010--Hb_004735_010 Hb_005965_010 Hb_005965_010 Hb_123202_010--Hb_005965_010 Hb_002197_030 Hb_002197_030 Hb_000453_260--Hb_002197_030 Hb_000995_050 Hb_000995_050 Hb_000453_260--Hb_000995_050 Hb_015057_010 Hb_015057_010 Hb_000453_260--Hb_015057_010 Hb_004242_100 Hb_004242_100 Hb_000453_260--Hb_004242_100 Hb_000453_260--Hb_000329_770 Hb_000671_100 Hb_000671_100 Hb_010298_010--Hb_000671_100 Hb_010261_020 Hb_010261_020 Hb_010298_010--Hb_010261_020 Hb_024714_030 Hb_024714_030 Hb_010298_010--Hb_024714_030 Hb_033642_020 Hb_033642_020 Hb_010298_010--Hb_033642_020 Hb_000977_310 Hb_000977_310 Hb_010298_010--Hb_000977_310 Hb_000307_200 Hb_000307_200 Hb_010298_010--Hb_000307_200 Hb_000329_770--Hb_015057_010 Hb_011016_090 Hb_011016_090 Hb_000329_770--Hb_011016_090 Hb_006502_080 Hb_006502_080 Hb_000329_770--Hb_006502_080 Hb_002259_150 Hb_002259_150 Hb_000329_770--Hb_002259_150 Hb_000380_010 Hb_000380_010 Hb_000329_770--Hb_000380_010 Hb_028639_050 Hb_028639_050 Hb_000329_770--Hb_028639_050 Hb_006602_020 Hb_006602_020 Hb_006602_010--Hb_006602_020 Hb_002154_050 Hb_002154_050 Hb_006602_010--Hb_002154_050 Hb_005779_100 Hb_005779_100 Hb_006602_010--Hb_005779_100 Hb_000700_090 Hb_000700_090 Hb_006602_010--Hb_000700_090 Hb_005539_290 Hb_005539_290 Hb_006602_010--Hb_005539_290 Hb_006602_010--Hb_004735_010 Hb_004735_010--Hb_000700_090 Hb_001902_050 Hb_001902_050 Hb_004735_010--Hb_001902_050 Hb_004735_010--Hb_006602_020 Hb_004735_010--Hb_000671_100 Hb_000442_160 Hb_000442_160 Hb_004735_010--Hb_000442_160 Hb_006455_110 Hb_006455_110 Hb_005965_010--Hb_006455_110 Hb_073339_010 Hb_073339_010 Hb_005965_010--Hb_073339_010 Hb_106005_010 Hb_106005_010 Hb_005965_010--Hb_106005_010 Hb_012807_080 Hb_012807_080 Hb_005965_010--Hb_012807_080 Hb_006455_080 Hb_006455_080 Hb_005965_010--Hb_006455_080 Hb_006455_090 Hb_006455_090 Hb_005965_010--Hb_006455_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
60.4708 36.9344 2.44765 25.277 115.348 467.454
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
193.98 77.3244 164.832 71.9533 6.54716

CAGE analysis