Hb_112798_020

Information

Type -
Description -
Location Contig112798: 14892-15956
Sequence    

Annotation

kegg
ID rcu:RCOM_1039410
description dnajc14 protein, putative
nr
ID XP_002514038.1
description dnajc14 protein, putative [Ricinus communis]
swissprot
ID Q9NXW2
description DnaJ homolog subfamily B member 12 OS=Homo sapiens GN=DNAJB12 PE=1 SV=4
trembl
ID B9RJW9
description Dnajc14 protein, putative OS=Ricinus communis GN=RCOM_1039410 PE=4 SV=1
Gene Ontology
ID GO:0003677
description dnaj heat shock n-terminal domain-containing family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_112798_020 0.0 - - dnajc14 protein, putative [Ricinus communis]
2 Hb_002248_080 0.0603352096 - - PREDICTED: probable ubiquitin-conjugating enzyme E2 25 isoform X2 [Jatropha curcas]
3 Hb_004970_090 0.0620817198 - - PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Jatropha curcas]
4 Hb_017491_030 0.0638633579 - - PREDICTED: 40S ribosomal protein SA-like [Jatropha curcas]
5 Hb_000529_020 0.0676225274 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]
6 Hb_000796_210 0.0733368032 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000256_190 0.0740368063 - - PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Jatropha curcas]
8 Hb_000402_080 0.0768967659 - - PREDICTED: pentatricopeptide repeat-containing protein At1g60770 [Jatropha curcas]
9 Hb_004032_430 0.0769839761 - - PREDICTED: uncharacterized protein LOC105635169 [Jatropha curcas]
10 Hb_005048_130 0.0771049219 - - hypothetical protein POPTR_0004s03700g [Populus trichocarpa]
11 Hb_000275_170 0.0783554228 transcription factor TF Family: Trihelix PREDICTED: trihelix transcription factor GT-3b-like [Jatropha curcas]
12 Hb_002585_040 0.0795517196 - - PREDICTED: cell division control protein 48 homolog B [Jatropha curcas]
13 Hb_000563_230 0.0841583882 - - phospholipase d zeta, putative [Ricinus communis]
14 Hb_004310_150 0.0848960324 - - PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein [Vitis vinifera]
15 Hb_002783_310 0.0850117189 - - PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 [Jatropha curcas]
16 Hb_000220_040 0.0859789033 - - conserved hypothetical protein [Ricinus communis]
17 Hb_010712_030 0.0883381904 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001104_160 0.0885387581 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
19 Hb_005489_080 0.0890574873 - - conserved hypothetical protein [Ricinus communis]
20 Hb_004586_140 0.0902591792 - - PREDICTED: uncharacterized protein LOC105630689 [Jatropha curcas]

Gene co-expression network

sample Hb_112798_020 Hb_112798_020 Hb_002248_080 Hb_002248_080 Hb_112798_020--Hb_002248_080 Hb_004970_090 Hb_004970_090 Hb_112798_020--Hb_004970_090 Hb_017491_030 Hb_017491_030 Hb_112798_020--Hb_017491_030 Hb_000529_020 Hb_000529_020 Hb_112798_020--Hb_000529_020 Hb_000796_210 Hb_000796_210 Hb_112798_020--Hb_000796_210 Hb_000256_190 Hb_000256_190 Hb_112798_020--Hb_000256_190 Hb_000152_380 Hb_000152_380 Hb_002248_080--Hb_000152_380 Hb_000096_070 Hb_000096_070 Hb_002248_080--Hb_000096_070 Hb_004310_150 Hb_004310_150 Hb_002248_080--Hb_004310_150 Hb_000780_230 Hb_000780_230 Hb_002248_080--Hb_000780_230 Hb_031527_040 Hb_031527_040 Hb_002248_080--Hb_031527_040 Hb_004970_090--Hb_017491_030 Hb_005489_080 Hb_005489_080 Hb_004970_090--Hb_005489_080 Hb_000732_120 Hb_000732_120 Hb_004970_090--Hb_000732_120 Hb_011512_080 Hb_011512_080 Hb_004970_090--Hb_011512_080 Hb_001104_160 Hb_001104_160 Hb_004970_090--Hb_001104_160 Hb_002783_310 Hb_002783_310 Hb_017491_030--Hb_002783_310 Hb_017491_030--Hb_005489_080 Hb_003952_070 Hb_003952_070 Hb_017491_030--Hb_003952_070 Hb_001486_340 Hb_001486_340 Hb_017491_030--Hb_001486_340 Hb_000529_020--Hb_002248_080 Hb_000008_330 Hb_000008_330 Hb_000529_020--Hb_000008_330 Hb_000109_160 Hb_000109_160 Hb_000529_020--Hb_000109_160 Hb_004724_320 Hb_004724_320 Hb_000529_020--Hb_004724_320 Hb_007590_050 Hb_007590_050 Hb_000529_020--Hb_007590_050 Hb_003428_030 Hb_003428_030 Hb_000796_210--Hb_003428_030 Hb_000032_270 Hb_000032_270 Hb_000796_210--Hb_000032_270 Hb_000610_050 Hb_000610_050 Hb_000796_210--Hb_000610_050 Hb_007576_080 Hb_007576_080 Hb_000796_210--Hb_007576_080 Hb_002245_030 Hb_002245_030 Hb_000796_210--Hb_002245_030 Hb_006916_040 Hb_006916_040 Hb_000256_190--Hb_006916_040 Hb_001347_040 Hb_001347_040 Hb_000256_190--Hb_001347_040 Hb_004631_180 Hb_004631_180 Hb_000256_190--Hb_004631_180 Hb_003124_220 Hb_003124_220 Hb_000256_190--Hb_003124_220 Hb_003549_150 Hb_003549_150 Hb_000256_190--Hb_003549_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.6608 27.0079 13.646 15.3921 28.1459 21.2019
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
18.0023 26.6598 13.7645 16.0656 7.3489

CAGE analysis