Hb_091226_010

Information

Type -
Description -
Location Contig91226: 6972-13873
Sequence    

Annotation

kegg
ID rcu:RCOM_0602000
description hypothetical protein
nr
ID XP_012079184.1
description PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
swissprot
ID Q9CAD5
description Mitogen-activated protein kinase kinase kinase YODA OS=Arabidopsis thaliana GN=YDA PE=1 SV=1
trembl
ID A0A067K6M6
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12352 PE=4 SV=1
Gene Ontology
ID GO:0004672
description mitogen-activated protein kinase kinase kinase anp1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62161: 7061-11295
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_091226_010 0.0 - - PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Jatropha curcas]
2 Hb_005499_010 0.0898794173 transcription factor TF Family: TRAF Regulatory protein NPR1, putative [Ricinus communis]
3 Hb_000084_240 0.100934511 - - PREDICTED: F-box/kelch-repeat protein At1g57790-like [Jatropha curcas]
4 Hb_000163_230 0.1011621128 - - Phytochrome A-associated F-box protein, putative [Ricinus communis]
5 Hb_000045_260 0.1078683717 - - protein with unknown function [Ricinus communis]
6 Hb_000454_140 0.1087406909 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2a-like [Jatropha curcas]
7 Hb_003078_030 0.1105242909 - - PREDICTED: E3 ubiquitin-protein ligase CHIP [Jatropha curcas]
8 Hb_000186_200 0.1116397517 - - PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Populus euphratica]
9 Hb_002701_210 0.1221616276 - - Protein COBRA precursor, putative [Ricinus communis]
10 Hb_001009_090 0.1234468465 - - CDK protein [Hevea brasiliensis]
11 Hb_000056_300 0.1269809535 - - PREDICTED: probable methyltransferase PMT2 isoform X2 [Jatropha curcas]
12 Hb_011631_010 0.1318401719 - - PREDICTED: uncharacterized protein LOC105641795 [Jatropha curcas]
13 Hb_003001_070 0.1318910549 transcription factor TF Family: ERF hypothetical protein POPTR_0002s24750g [Populus trichocarpa]
14 Hb_002107_060 0.1325876956 - - PREDICTED: uncharacterized protein LOC105635312 [Jatropha curcas]
15 Hb_000465_080 0.1363895862 - - PREDICTED: E3 ubiquitin-protein ligase RBBP6-like [Jatropha curcas]
16 Hb_002897_050 0.1366355528 - - PREDICTED: uncharacterized protein LOC105649158 [Jatropha curcas]
17 Hb_000152_760 0.1371874885 - - conserved hypothetical protein [Ricinus communis]
18 Hb_000671_060 0.137225457 - - protein binding protein, putative [Ricinus communis]
19 Hb_007849_050 0.1405122121 transcription factor TF Family: Jumonji PREDICTED: putative lysine-specific demethylase JMJ16 [Jatropha curcas]
20 Hb_090782_010 0.1417872969 - - PREDICTED: diacylglycerol kinase 5-like [Jatropha curcas]

Gene co-expression network

sample Hb_091226_010 Hb_091226_010 Hb_005499_010 Hb_005499_010 Hb_091226_010--Hb_005499_010 Hb_000084_240 Hb_000084_240 Hb_091226_010--Hb_000084_240 Hb_000163_230 Hb_000163_230 Hb_091226_010--Hb_000163_230 Hb_000045_260 Hb_000045_260 Hb_091226_010--Hb_000045_260 Hb_000454_140 Hb_000454_140 Hb_091226_010--Hb_000454_140 Hb_003078_030 Hb_003078_030 Hb_091226_010--Hb_003078_030 Hb_005499_010--Hb_000084_240 Hb_011631_010 Hb_011631_010 Hb_005499_010--Hb_011631_010 Hb_005499_010--Hb_000454_140 Hb_005499_010--Hb_000045_260 Hb_002897_050 Hb_002897_050 Hb_005499_010--Hb_002897_050 Hb_000186_200 Hb_000186_200 Hb_000084_240--Hb_000186_200 Hb_000084_240--Hb_002897_050 Hb_000084_240--Hb_000045_260 Hb_002107_060 Hb_002107_060 Hb_000084_240--Hb_002107_060 Hb_000084_240--Hb_011631_010 Hb_000163_230--Hb_000454_140 Hb_001009_090 Hb_001009_090 Hb_000163_230--Hb_001009_090 Hb_000163_230--Hb_000045_260 Hb_000163_230--Hb_003078_030 Hb_000671_060 Hb_000671_060 Hb_000163_230--Hb_000671_060 Hb_000163_230--Hb_000186_200 Hb_000045_260--Hb_011631_010 Hb_000638_280 Hb_000638_280 Hb_000045_260--Hb_000638_280 Hb_000045_260--Hb_000454_140 Hb_000045_260--Hb_002897_050 Hb_007849_050 Hb_007849_050 Hb_000454_140--Hb_007849_050 Hb_012305_140 Hb_012305_140 Hb_000454_140--Hb_012305_140 Hb_005694_130 Hb_005694_130 Hb_000454_140--Hb_005694_130 Hb_000056_300 Hb_000056_300 Hb_003078_030--Hb_000056_300 Hb_003078_030--Hb_000186_200 Hb_003078_030--Hb_001009_090 Hb_005000_300 Hb_005000_300 Hb_003078_030--Hb_005000_300 Hb_000836_370 Hb_000836_370 Hb_003078_030--Hb_000836_370
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
16.3422 97.7107 55.4757 22.1742 23.1607 14.8377
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.06745 10.8767 14.2908 7.44097 13.0673

CAGE analysis