Hb_066415_010

Information

Type -
Description -
Location Contig66415: 994-1294
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_066415_010 0.0 - - -
2 Hb_009815_010 0.2847649555 - - -
3 Hb_143629_160 0.293683769 - - nitrate transporter, putative [Ricinus communis]
4 Hb_000563_580 0.3188428452 - - acyltransferase, putative [Ricinus communis]
5 Hb_004266_010 0.3208242436 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
6 Hb_000640_180 0.3217197631 - - enzyme inhibitor, putative [Ricinus communis]
7 Hb_000046_530 0.3251328578 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
8 Hb_001823_080 0.3269219855 - - hypothetical protein VITISV_012142 [Vitis vinifera]
9 Hb_013394_090 0.3342711146 - - conserved hypothetical protein [Ricinus communis]
10 Hb_102748_010 0.3397034721 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
11 Hb_182823_010 0.3399673456 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
12 Hb_003117_050 0.3428358128 - - -
13 Hb_000076_170 0.354897091 - - hypothetical protein JCGZ_00832 [Jatropha curcas]
14 Hb_011468_010 0.3706429221 - - hypothetical protein B456_008G198600 [Gossypium raimondii]
15 Hb_005181_200 0.3761116189 transcription factor TF Family: GRAS PREDICTED: DELLA protein RGL1-like [Jatropha curcas]
16 Hb_003581_160 0.3766848644 - - -
17 Hb_046198_020 0.376927904 - - conserved hypothetical protein [Ricinus communis]
18 Hb_001621_160 0.3926038425 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
19 Hb_002188_020 0.3967268898 - - unnamed protein product [Vitis vinifera]
20 Hb_001504_090 0.3995257253 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_066415_010 Hb_066415_010 Hb_009815_010 Hb_009815_010 Hb_066415_010--Hb_009815_010 Hb_143629_160 Hb_143629_160 Hb_066415_010--Hb_143629_160 Hb_000563_580 Hb_000563_580 Hb_066415_010--Hb_000563_580 Hb_004266_010 Hb_004266_010 Hb_066415_010--Hb_004266_010 Hb_000640_180 Hb_000640_180 Hb_066415_010--Hb_000640_180 Hb_000046_530 Hb_000046_530 Hb_066415_010--Hb_000046_530 Hb_001823_080 Hb_001823_080 Hb_009815_010--Hb_001823_080 Hb_182823_010 Hb_182823_010 Hb_009815_010--Hb_182823_010 Hb_009815_010--Hb_000640_180 Hb_009815_010--Hb_000563_580 Hb_009815_010--Hb_000046_530 Hb_143629_160--Hb_000563_580 Hb_143629_160--Hb_000640_180 Hb_143629_160--Hb_000046_530 Hb_102748_010 Hb_102748_010 Hb_143629_160--Hb_102748_010 Hb_176082_010 Hb_176082_010 Hb_143629_160--Hb_176082_010 Hb_000563_580--Hb_000640_180 Hb_000563_580--Hb_000046_530 Hb_000563_580--Hb_102748_010 Hb_000563_580--Hb_176082_010 Hb_148777_020 Hb_148777_020 Hb_000563_580--Hb_148777_020 Hb_000679_160 Hb_000679_160 Hb_004266_010--Hb_000679_160 Hb_005181_200 Hb_005181_200 Hb_004266_010--Hb_005181_200 Hb_176012_010 Hb_176012_010 Hb_004266_010--Hb_176012_010 Hb_121921_010 Hb_121921_010 Hb_004266_010--Hb_121921_010 Hb_000076_170 Hb_000076_170 Hb_004266_010--Hb_000076_170 Hb_000640_180--Hb_000046_530 Hb_000640_180--Hb_102748_010 Hb_000640_180--Hb_176082_010 Hb_000640_180--Hb_148777_020 Hb_000046_530--Hb_102748_010 Hb_000046_530--Hb_176082_010 Hb_000046_530--Hb_148777_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.453835 1.06156 0.148188
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.135631 0

CAGE analysis