Hb_009815_010

Information

Type -
Description -
Location Contig9815: 1799-9020
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009815_010 0.0 - - -
2 Hb_001823_080 0.0583816029 - - hypothetical protein VITISV_012142 [Vitis vinifera]
3 Hb_182823_010 0.1306784172 - - PREDICTED: thylakoidal processing peptidase 1, chloroplastic-like [Jatropha curcas]
4 Hb_066415_010 0.2847649555 - - -
5 Hb_000640_180 0.352321145 - - enzyme inhibitor, putative [Ricinus communis]
6 Hb_000563_580 0.3523403938 - - acyltransferase, putative [Ricinus communis]
7 Hb_000046_530 0.3524506901 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF086 [Jatropha curcas]
8 Hb_000544_170 0.3525819703 - - conserved hypothetical protein [Ricinus communis]
9 Hb_102748_010 0.3544839916 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103696607 [Phoenix dactylifera]
10 Hb_005054_050 0.3598834382 - - PREDICTED: uncharacterized protein At1g04910-like [Jatropha curcas]
11 Hb_111985_010 0.3613046506 - - -
12 Hb_143629_160 0.3628050624 - - nitrate transporter, putative [Ricinus communis]
13 Hb_000836_100 0.3695179674 - - conserved hypothetical protein [Ricinus communis]
14 Hb_176082_010 0.3849837707 - - PREDICTED: pirin-like protein [Jatropha curcas]
15 Hb_001621_160 0.3915124922 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
16 Hb_005928_090 0.3991517871 - - PREDICTED: magnesium transporter MRS2-I-like isoform X3 [Jatropha curcas]
17 Hb_148777_020 0.4003748926 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Populus euphratica]
18 Hb_030784_010 0.4065716509 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
19 Hb_001504_090 0.4075303511 transcription factor TF Family: C2H2 zinc finger protein, putative [Ricinus communis]
20 Hb_002374_560 0.4092061943 - - PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH11-like [Populus euphratica]

Gene co-expression network

sample Hb_009815_010 Hb_009815_010 Hb_001823_080 Hb_001823_080 Hb_009815_010--Hb_001823_080 Hb_182823_010 Hb_182823_010 Hb_009815_010--Hb_182823_010 Hb_066415_010 Hb_066415_010 Hb_009815_010--Hb_066415_010 Hb_000640_180 Hb_000640_180 Hb_009815_010--Hb_000640_180 Hb_000563_580 Hb_000563_580 Hb_009815_010--Hb_000563_580 Hb_000046_530 Hb_000046_530 Hb_009815_010--Hb_000046_530 Hb_001823_080--Hb_182823_010 Hb_000544_170 Hb_000544_170 Hb_001823_080--Hb_000544_170 Hb_001823_080--Hb_066415_010 Hb_111985_010 Hb_111985_010 Hb_001823_080--Hb_111985_010 Hb_000836_100 Hb_000836_100 Hb_001823_080--Hb_000836_100 Hb_182823_010--Hb_000544_170 Hb_182823_010--Hb_000836_100 Hb_182823_010--Hb_066415_010 Hb_005054_050 Hb_005054_050 Hb_182823_010--Hb_005054_050 Hb_143629_160 Hb_143629_160 Hb_066415_010--Hb_143629_160 Hb_066415_010--Hb_000563_580 Hb_004266_010 Hb_004266_010 Hb_066415_010--Hb_004266_010 Hb_066415_010--Hb_000640_180 Hb_066415_010--Hb_000046_530 Hb_000640_180--Hb_000563_580 Hb_000640_180--Hb_000046_530 Hb_102748_010 Hb_102748_010 Hb_000640_180--Hb_102748_010 Hb_000640_180--Hb_143629_160 Hb_176082_010 Hb_176082_010 Hb_000640_180--Hb_176082_010 Hb_148777_020 Hb_148777_020 Hb_000640_180--Hb_148777_020 Hb_000563_580--Hb_000046_530 Hb_000563_580--Hb_102748_010 Hb_000563_580--Hb_143629_160 Hb_000563_580--Hb_176082_010 Hb_000563_580--Hb_148777_020 Hb_000046_530--Hb_102748_010 Hb_000046_530--Hb_143629_160 Hb_000046_530--Hb_176082_010 Hb_000046_530--Hb_148777_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0.026096 0.030076 0.0165134
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis