Hb_046198_010

Information

Type -
Description -
Location Contig46198: 6428-7776
Sequence    

Annotation

kegg
ID rcu:RCOM_0497310
description short-chain dehydrogenase, putative (EC:1.1.1.100)
nr
ID XP_012066739.1
description PREDICTED: NADPH-dependent pterin aldehyde reductase [Jatropha curcas]
swissprot
ID Q9SY73
description NADPH-dependent pterin aldehyde reductase OS=Arabidopsis thaliana GN=At1g10310 PE=1 SV=1
trembl
ID A0A067LDB8
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_00292 PE=3 SV=1
Gene Ontology
ID GO:0005829
description nadph-dependent pterin aldehyde reductase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_046198_010 0.0 - - PREDICTED: NADPH-dependent pterin aldehyde reductase [Jatropha curcas]
2 Hb_000335_020 0.1021779244 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
3 Hb_000011_330 0.1037452527 - - fyve finger-containing phosphoinositide kinase, fyv1, putative [Ricinus communis]
4 Hb_001266_060 0.1042172147 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g47840 [Jatropha curcas]
5 Hb_000567_380 0.1068096725 - - ubiquitin specific protease 39 and snrnp assembly factor, putative [Ricinus communis]
6 Hb_000330_100 0.1118273295 - - hypothetical protein VITISV_011650 [Vitis vinifera]
7 Hb_000063_140 0.1131933777 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein [Jatropha curcas]
8 Hb_000934_270 0.1132081934 - - PREDICTED: pentatricopeptide repeat-containing protein At3g21470 [Populus euphratica]
9 Hb_003680_200 0.1135765562 - - PREDICTED: F-box protein PP2-A15 [Jatropha curcas]
10 Hb_000007_150 0.1171380014 - - PREDICTED: pentatricopeptide repeat-containing protein At2g41080 [Jatropha curcas]
11 Hb_001975_160 0.1182960724 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
12 Hb_012325_020 0.1202908246 - - PREDICTED: ATPase family AAA domain-containing protein At1g05910 isoform X1 [Jatropha curcas]
13 Hb_003687_100 0.1205299748 - - PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Jatropha curcas]
14 Hb_001956_200 0.1215533971 - - pumilio/Puf RNA-binding domain-containing family protein [Populus trichocarpa]
15 Hb_001226_020 0.1217034605 - - PREDICTED: pentatricopeptide repeat-containing protein At1g05670, mitochondrial-like [Jatropha curcas]
16 Hb_002217_300 0.124251532 - - PREDICTED: pentatricopeptide repeat-containing protein At3g48810 [Jatropha curcas]
17 Hb_019654_100 0.1244115539 - - PREDICTED: tRNA pseudouridine synthase A, mitochondrial-like [Jatropha curcas]
18 Hb_002205_190 0.1249446594 - - PREDICTED: U-box domain-containing protein 62-like [Jatropha curcas]
19 Hb_000442_080 0.1258887482 - - hypothetical protein JCGZ_03373 [Jatropha curcas]
20 Hb_085863_030 0.1261845836 - - PREDICTED: pentatricopeptide repeat-containing protein At1g31430 [Jatropha curcas]

Gene co-expression network

sample Hb_046198_010 Hb_046198_010 Hb_000335_020 Hb_000335_020 Hb_046198_010--Hb_000335_020 Hb_000011_330 Hb_000011_330 Hb_046198_010--Hb_000011_330 Hb_001266_060 Hb_001266_060 Hb_046198_010--Hb_001266_060 Hb_000567_380 Hb_000567_380 Hb_046198_010--Hb_000567_380 Hb_000330_100 Hb_000330_100 Hb_046198_010--Hb_000330_100 Hb_000063_140 Hb_000063_140 Hb_046198_010--Hb_000063_140 Hb_000514_060 Hb_000514_060 Hb_000335_020--Hb_000514_060 Hb_001956_200 Hb_001956_200 Hb_000335_020--Hb_001956_200 Hb_000140_230 Hb_000140_230 Hb_000335_020--Hb_000140_230 Hb_008500_010 Hb_008500_010 Hb_000335_020--Hb_008500_010 Hb_001584_150 Hb_001584_150 Hb_000335_020--Hb_001584_150 Hb_000011_330--Hb_000567_380 Hb_002205_190 Hb_002205_190 Hb_000011_330--Hb_002205_190 Hb_003976_030 Hb_003976_030 Hb_000011_330--Hb_003976_030 Hb_000092_010 Hb_000092_010 Hb_000011_330--Hb_000092_010 Hb_000723_130 Hb_000723_130 Hb_000011_330--Hb_000723_130 Hb_001226_020 Hb_001226_020 Hb_001266_060--Hb_001226_020 Hb_001266_060--Hb_001956_200 Hb_004452_010 Hb_004452_010 Hb_001266_060--Hb_004452_010 Hb_000427_050 Hb_000427_050 Hb_001266_060--Hb_000427_050 Hb_031042_020 Hb_031042_020 Hb_001266_060--Hb_031042_020 Hb_003687_100 Hb_003687_100 Hb_001266_060--Hb_003687_100 Hb_000567_380--Hb_002205_190 Hb_008695_140 Hb_008695_140 Hb_000567_380--Hb_008695_140 Hb_000567_380--Hb_003976_030 Hb_012325_020 Hb_012325_020 Hb_000567_380--Hb_012325_020 Hb_050622_050 Hb_050622_050 Hb_000567_380--Hb_050622_050 Hb_001450_050 Hb_001450_050 Hb_000330_100--Hb_001450_050 Hb_000796_220 Hb_000796_220 Hb_000330_100--Hb_000796_220 Hb_002217_300 Hb_002217_300 Hb_000330_100--Hb_002217_300 Hb_000832_020 Hb_000832_020 Hb_000330_100--Hb_000832_020 Hb_028089_010 Hb_028089_010 Hb_000330_100--Hb_028089_010 Hb_000175_460 Hb_000175_460 Hb_000063_140--Hb_000175_460 Hb_010172_050 Hb_010172_050 Hb_000063_140--Hb_010172_050 Hb_085863_030 Hb_085863_030 Hb_000063_140--Hb_085863_030 Hb_003862_050 Hb_003862_050 Hb_000063_140--Hb_003862_050 Hb_005348_140 Hb_005348_140 Hb_000063_140--Hb_005348_140 Hb_001617_050 Hb_001617_050 Hb_000063_140--Hb_001617_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.8346 9.80085 7.02666 6.27236 18.548 13.735
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.60222 14.6789 35.5333 9.86755 6.49687

CAGE analysis