Hb_050622_050

Information

Type -
Description -
Location Contig50622: 45023-47119
Sequence    

Annotation

kegg
ID rcu:RCOM_1580150
description heat shock protein binding protein, putative
nr
ID XP_012090104.1
description PREDICTED: uncharacterized protein LOC105648353 [Jatropha curcas]
swissprot
ID Q7ZXQ8
description DnaJ homolog subfamily B member 14 OS=Xenopus laevis GN=dnajb14 PE=2 SV=1
trembl
ID A0A067JEB4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25993 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_46129: 44493-45336 , PASA_asmbl_46131: 46758-49053 , PASA_asmbl_46132: 47710-48051
cDNA
(Sanger)
(ID:Location)		 020_C12.ab1: 46766-49053

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_050622_050 0.0 - - PREDICTED: uncharacterized protein LOC105648353 [Jatropha curcas]
2 Hb_004117_260 0.0717309672 - - conserved hypothetical protein [Ricinus communis]
3 Hb_006017_010 0.0732996023 - - PREDICTED: alkylated DNA repair protein alkB homolog 8 [Jatropha curcas]
4 Hb_001617_050 0.0746518383 - - PREDICTED: uncharacterized protein LOC105649351 isoform X1 [Jatropha curcas]
5 Hb_000297_010 0.0795950767 - - PREDICTED: uncharacterized protein LOC105637916 isoform X2 [Jatropha curcas]
6 Hb_002110_150 0.0804738038 - - PREDICTED: serine/threonine-protein kinase PEPKR2 [Jatropha curcas]
7 Hb_001318_270 0.0816330183 - - PREDICTED: pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like [Jatropha curcas]
8 Hb_004208_030 0.0836655309 transcription factor TF Family: MYB-related PREDICTED: TSL-kinase interacting protein 1 [Jatropha curcas]
9 Hb_015934_040 0.085170973 - - PREDICTED: protein Hook homolog 3-like [Jatropha curcas]
10 Hb_022256_020 0.0863711586 - - PREDICTED: pentatricopeptide repeat-containing protein At4g35130, chloroplastic [Jatropha curcas]
11 Hb_004724_150 0.0871593404 - - expressed protein, putative [Ricinus communis]
12 Hb_000041_110 0.0892287139 - - PREDICTED: WW domain-binding protein 11 isoform X1 [Jatropha curcas]
13 Hb_000676_010 0.0900774899 - - PREDICTED: pentatricopeptide repeat-containing protein At1g20230-like [Jatropha curcas]
14 Hb_007416_330 0.0904373934 - - PREDICTED: elongation factor 1-alpha isoform X1 [Jatropha curcas]
15 Hb_032202_140 0.0929970108 - - PREDICTED: flap endonuclease GEN-like 1 [Jatropha curcas]
16 Hb_000926_090 0.0930907081 - - PREDICTED: dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex 2, mitochondrial-like [Jatropha curcas]
17 Hb_007163_120 0.0932846882 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
18 Hb_024621_040 0.094041608 transcription factor TF Family: ERF hypothetical protein L484_014666 [Morus notabilis]
19 Hb_000172_430 0.0944104565 - - conserved hypothetical protein [Ricinus communis]
20 Hb_012325_020 0.0948093531 - - PREDICTED: ATPase family AAA domain-containing protein At1g05910 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_050622_050 Hb_050622_050 Hb_004117_260 Hb_004117_260 Hb_050622_050--Hb_004117_260 Hb_006017_010 Hb_006017_010 Hb_050622_050--Hb_006017_010 Hb_001617_050 Hb_001617_050 Hb_050622_050--Hb_001617_050 Hb_000297_010 Hb_000297_010 Hb_050622_050--Hb_000297_010 Hb_002110_150 Hb_002110_150 Hb_050622_050--Hb_002110_150 Hb_001318_270 Hb_001318_270 Hb_050622_050--Hb_001318_270 Hb_000393_020 Hb_000393_020 Hb_004117_260--Hb_000393_020 Hb_003657_010 Hb_003657_010 Hb_004117_260--Hb_003657_010 Hb_004117_260--Hb_006017_010 Hb_000926_090 Hb_000926_090 Hb_004117_260--Hb_000926_090 Hb_001314_070 Hb_001314_070 Hb_004117_260--Hb_001314_070 Hb_007416_330 Hb_007416_330 Hb_006017_010--Hb_007416_330 Hb_105105_020 Hb_105105_020 Hb_006017_010--Hb_105105_020 Hb_006915_030 Hb_006915_030 Hb_006017_010--Hb_006915_030 Hb_015934_040 Hb_015934_040 Hb_006017_010--Hb_015934_040 Hb_005348_140 Hb_005348_140 Hb_001617_050--Hb_005348_140 Hb_010128_080 Hb_010128_080 Hb_001617_050--Hb_010128_080 Hb_000646_050 Hb_000646_050 Hb_001617_050--Hb_000646_050 Hb_000538_270 Hb_000538_270 Hb_001617_050--Hb_000538_270 Hb_001226_040 Hb_001226_040 Hb_001617_050--Hb_001226_040 Hb_000185_030 Hb_000185_030 Hb_000297_010--Hb_000185_030 Hb_004724_150 Hb_004724_150 Hb_000297_010--Hb_004724_150 Hb_000297_010--Hb_015934_040 Hb_000245_040 Hb_000245_040 Hb_000297_010--Hb_000245_040 Hb_000041_100 Hb_000041_100 Hb_000297_010--Hb_000041_100 Hb_000840_250 Hb_000840_250 Hb_000297_010--Hb_000840_250 Hb_002046_180 Hb_002046_180 Hb_002110_150--Hb_002046_180 Hb_008725_260 Hb_008725_260 Hb_002110_150--Hb_008725_260 Hb_005779_060 Hb_005779_060 Hb_002110_150--Hb_005779_060 Hb_005463_100 Hb_005463_100 Hb_002110_150--Hb_005463_100 Hb_000016_250 Hb_000016_250 Hb_002110_150--Hb_000016_250 Hb_009767_110 Hb_009767_110 Hb_002110_150--Hb_009767_110 Hb_012325_020 Hb_012325_020 Hb_001318_270--Hb_012325_020 Hb_001318_270--Hb_002110_150 Hb_001726_020 Hb_001726_020 Hb_001318_270--Hb_001726_020 Hb_001318_270--Hb_000041_100 Hb_000783_020 Hb_000783_020 Hb_001318_270--Hb_000783_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
4.4935 5.42134 4.28345 3.52665 4.55856 3.69992
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
3.46941 4.90368 8.86255 4.79805 3.88704

CAGE analysis