Hb_019762_010

Information

Type -
Description -
Location Contig19762: 8226-10820
Sequence    

Annotation

kegg
ID rcu:RCOM_1031500
description s-receptor kinase, putative (EC:2.7.10.2)
nr
ID KDP32770.1
description hypothetical protein JCGZ_12062 [Jatropha curcas]
swissprot
ID O65238
description G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 OS=Arabidopsis thaliana GN=At5g35370 PE=2 SV=2
trembl
ID A0A067KKI6
description Serine/threonine-protein kinase OS=Jatropha curcas GN=JCGZ_12062 PE=3 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase at5g35370

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19866: 8660-9115 , PASA_asmbl_19867: 9385-9601
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_019762_010 0.0 - - hypothetical protein JCGZ_12062 [Jatropha curcas]
2 Hb_000831_060 0.1200806788 - - 17.5 kd heat shock family protein [Populus trichocarpa]
3 Hb_000923_070 0.1229450215 - - conserved hypothetical protein [Ricinus communis]
4 Hb_002374_490 0.1362765486 - - conserved hypothetical protein [Ricinus communis]
5 Hb_009026_050 0.1410591676 - - vacuolar ATPase F subunit [Hevea brasiliensis]
6 Hb_002078_050 0.1443611274 - - PREDICTED: protein kish-like [Nicotiana tomentosiformis]
7 Hb_000463_040 0.1511930724 - - PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Jatropha curcas]
8 Hb_003216_100 0.1520356432 - - PREDICTED: uncharacterized protein LOC105641496 [Jatropha curcas]
9 Hb_002307_030 0.1530036387 - - 40S ribosomal protein S15D [Hevea brasiliensis]
10 Hb_004223_230 0.1530181198 transcription factor TF Family: ARF PREDICTED: auxin response factor 5 isoform X1 [Jatropha curcas]
11 Hb_000089_130 0.1538167778 - - mitochondrial ribosomal protein S16, putative [Ricinus communis]
12 Hb_002849_210 0.1544647478 - - protein binding protein, putative [Ricinus communis]
13 Hb_002662_100 0.1553683756 - - PREDICTED: uncharacterized protein LOC105630921 [Jatropha curcas]
14 Hb_000617_050 0.1553801067 - - PREDICTED: uncharacterized protein LOC105647466 [Jatropha curcas]
15 Hb_000599_090 0.1567766451 - - hypothetical protein POPTR_0002s039001g, partial [Populus trichocarpa]
16 Hb_000189_270 0.1589605774 - - PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1 [Jatropha curcas]
17 Hb_073973_110 0.1619787108 - - PREDICTED: uncharacterized protein LOC105638912 [Jatropha curcas]
18 Hb_000313_380 0.1646978906 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000339_070 0.1668345034 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Populus euphratica]
20 Hb_004586_190 0.1672096772 - - PREDICTED: protein CutA, chloroplastic [Jatropha curcas]

Gene co-expression network

sample Hb_019762_010 Hb_019762_010 Hb_000831_060 Hb_000831_060 Hb_019762_010--Hb_000831_060 Hb_000923_070 Hb_000923_070 Hb_019762_010--Hb_000923_070 Hb_002374_490 Hb_002374_490 Hb_019762_010--Hb_002374_490 Hb_009026_050 Hb_009026_050 Hb_019762_010--Hb_009026_050 Hb_002078_050 Hb_002078_050 Hb_019762_010--Hb_002078_050 Hb_000463_040 Hb_000463_040 Hb_019762_010--Hb_000463_040 Hb_000089_130 Hb_000089_130 Hb_000831_060--Hb_000089_130 Hb_005348_080 Hb_005348_080 Hb_000831_060--Hb_005348_080 Hb_073973_110 Hb_073973_110 Hb_000831_060--Hb_073973_110 Hb_000831_060--Hb_009026_050 Hb_008016_010 Hb_008016_010 Hb_000831_060--Hb_008016_010 Hb_000563_590 Hb_000563_590 Hb_000831_060--Hb_000563_590 Hb_000836_070 Hb_000836_070 Hb_000923_070--Hb_000836_070 Hb_000376_050 Hb_000376_050 Hb_000923_070--Hb_000376_050 Hb_002307_030 Hb_002307_030 Hb_000923_070--Hb_002307_030 Hb_001243_050 Hb_001243_050 Hb_000923_070--Hb_001243_050 Hb_000956_010 Hb_000956_010 Hb_000923_070--Hb_000956_010 Hb_003216_100 Hb_003216_100 Hb_000923_070--Hb_003216_100 Hb_002374_490--Hb_002307_030 Hb_004297_100 Hb_004297_100 Hb_002374_490--Hb_004297_100 Hb_024835_030 Hb_024835_030 Hb_002374_490--Hb_024835_030 Hb_004645_050 Hb_004645_050 Hb_002374_490--Hb_004645_050 Hb_007747_090 Hb_007747_090 Hb_002374_490--Hb_007747_090 Hb_000156_130 Hb_000156_130 Hb_002374_490--Hb_000156_130 Hb_009026_050--Hb_000089_130 Hb_025087_010 Hb_025087_010 Hb_009026_050--Hb_025087_010 Hb_001366_230 Hb_001366_230 Hb_009026_050--Hb_001366_230 Hb_000313_380 Hb_000313_380 Hb_009026_050--Hb_000313_380 Hb_002025_320 Hb_002025_320 Hb_009026_050--Hb_002025_320 Hb_183963_020 Hb_183963_020 Hb_009026_050--Hb_183963_020 Hb_011161_040 Hb_011161_040 Hb_002078_050--Hb_011161_040 Hb_000152_430 Hb_000152_430 Hb_002078_050--Hb_000152_430 Hb_002078_450 Hb_002078_450 Hb_002078_050--Hb_002078_450 Hb_002078_050--Hb_000089_130 Hb_001427_120 Hb_001427_120 Hb_002078_050--Hb_001427_120 Hb_001718_100 Hb_001718_100 Hb_002078_050--Hb_001718_100 Hb_002007_270 Hb_002007_270 Hb_000463_040--Hb_002007_270 Hb_000977_080 Hb_000977_080 Hb_000463_040--Hb_000977_080 Hb_000260_050 Hb_000260_050 Hb_000463_040--Hb_000260_050 Hb_000463_040--Hb_007747_090 Hb_000576_030 Hb_000576_030 Hb_000463_040--Hb_000576_030 Hb_005078_040 Hb_005078_040 Hb_000463_040--Hb_005078_040
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.8457 0.599074 0.0621066 0.192518 1.21815 1.60675
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.11992 2.47019 1.45201 0.159026 0

CAGE analysis