Hb_011316_130

Information

Type -
Description -
Location Contig11316: 90437-91759
Sequence    

Annotation

kegg
ID rcu:RCOM_1498360
description serine-threonine protein kinase, plant-type, putative (EC:2.7.10.2)
nr
ID XP_002510877.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LSC2
description PTI1-like tyrosine-protein kinase At3g15890 OS=Arabidopsis thaliana GN=At3g15890 PE=2 SV=1
trembl
ID B9R9K2
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_1498360 PE=3 SV=1
Gene Ontology
ID GO:0004672
description pti1-like tyrosine-protein kinase at3g15890

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_011316_130 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000264_270 0.1585668355 transcription factor TF Family: HSF -
3 Hb_000466_150 0.2135432338 - - hypothetical protein JCGZ_02123 [Jatropha curcas]
4 Hb_017987_010 0.2154374564 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 3-like isoform X1 [Populus euphratica]
5 Hb_008953_010 0.2180886781 - - PREDICTED: serine/threonine-protein kinase PBS1 isoform X2 [Solanum lycopersicum]
6 Hb_089610_010 0.2197000013 - - PREDICTED: uncharacterized protein LOC105785094 [Gossypium raimondii]
7 Hb_000375_040 0.2208390195 transcription factor TF Family: MYB-related PREDICTED: myb-related protein 308-like [Populus euphratica]
8 Hb_043903_010 0.2359107371 - - PREDICTED: protein kinase 2B, chloroplastic-like [Tarenaya hassleriana]
9 Hb_003663_030 0.239019113 - - PREDICTED: early nodulin-93-like [Jatropha curcas]
10 Hb_002161_020 0.2403725315 transcription factor TF Family: bZIP hypothetical protein POPTR_0006s05770g, partial [Populus trichocarpa]
11 Hb_000002_450 0.2404175134 - - hypothetical protein JCGZ_02285 [Jatropha curcas]
12 Hb_000008_130 0.2494644058 - - PREDICTED: uncharacterized protein LOC105630320 isoform X1 [Jatropha curcas]
13 Hb_000013_040 0.2494644058 - - -
14 Hb_000013_070 0.2494644058 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
15 Hb_000014_180 0.2494644058 - - PREDICTED: endo-1,4-beta-xylanase D-like [Fragaria vesca subsp. vesca]
16 Hb_000021_080 0.2494644058 - - -
17 Hb_000031_270 0.2494644058 transcription factor TF Family: B3 DNA binding protein, putative [Ricinus communis]
18 Hb_000035_070 0.2494644058 - - PREDICTED: uncharacterized protein LOC104814513 [Tarenaya hassleriana]
19 Hb_000041_140 0.2494644058 - - -
20 Hb_000043_130 0.2494644058 - - -

Gene co-expression network

sample Hb_011316_130 Hb_011316_130 Hb_000264_270 Hb_000264_270 Hb_011316_130--Hb_000264_270 Hb_000466_150 Hb_000466_150 Hb_011316_130--Hb_000466_150 Hb_017987_010 Hb_017987_010 Hb_011316_130--Hb_017987_010 Hb_008953_010 Hb_008953_010 Hb_011316_130--Hb_008953_010 Hb_089610_010 Hb_089610_010 Hb_011316_130--Hb_089610_010 Hb_000375_040 Hb_000375_040 Hb_011316_130--Hb_000375_040 Hb_000264_270--Hb_008953_010 Hb_002161_020 Hb_002161_020 Hb_000264_270--Hb_002161_020 Hb_000264_270--Hb_000375_040 Hb_000828_030 Hb_000828_030 Hb_000264_270--Hb_000828_030 Hb_081224_010 Hb_081224_010 Hb_000264_270--Hb_081224_010 Hb_007437_010 Hb_007437_010 Hb_000264_270--Hb_007437_010 Hb_000466_150--Hb_002161_020 Hb_002173_080 Hb_002173_080 Hb_000466_150--Hb_002173_080 Hb_000109_110 Hb_000109_110 Hb_000466_150--Hb_000109_110 Hb_004097_080 Hb_004097_080 Hb_000466_150--Hb_004097_080 Hb_001040_190 Hb_001040_190 Hb_000466_150--Hb_001040_190 Hb_000059_100 Hb_000059_100 Hb_000466_150--Hb_000059_100 Hb_000684_060 Hb_000684_060 Hb_017987_010--Hb_000684_060 Hb_010253_010 Hb_010253_010 Hb_017987_010--Hb_010253_010 Hb_007926_020 Hb_007926_020 Hb_017987_010--Hb_007926_020 Hb_148986_010 Hb_148986_010 Hb_017987_010--Hb_148986_010 Hb_017987_010--Hb_008953_010 Hb_003857_010 Hb_003857_010 Hb_017987_010--Hb_003857_010 Hb_008953_010--Hb_000375_040 Hb_043903_010 Hb_043903_010 Hb_008953_010--Hb_043903_010 Hb_008953_010--Hb_000828_030 Hb_008953_010--Hb_081224_010 Hb_005726_030 Hb_005726_030 Hb_008953_010--Hb_005726_030 Hb_061590_010 Hb_061590_010 Hb_008953_010--Hb_061590_010 Hb_002595_020 Hb_002595_020 Hb_089610_010--Hb_002595_020 Hb_031862_280 Hb_031862_280 Hb_089610_010--Hb_031862_280 Hb_004908_010 Hb_004908_010 Hb_089610_010--Hb_004908_010 Hb_170935_010 Hb_170935_010 Hb_089610_010--Hb_170935_010 Hb_089610_010--Hb_017987_010 Hb_000375_040--Hb_043903_010 Hb_000375_040--Hb_000828_030 Hb_000375_040--Hb_081224_010 Hb_187247_010 Hb_187247_010 Hb_000375_040--Hb_187247_010 Hb_000375_040--Hb_061590_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0269277 0 0 0 0 0.0236345
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.37423 0

CAGE analysis