Hb_010174_140

Information

Type -
Description -
Location Contig10174: 128272-131187
Sequence    

Annotation

kegg
ID rcu:RCOM_1082570
description Alpha-L-fucosidase 2 precursor, putative
nr
ID XP_002515022.1
description Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
swissprot
ID Q9STM6
description GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana GN=At3g48460 PE=2 SV=1
trembl
ID B9RMQ3
description Alpha-L-fucosidase 2, putative OS=Ricinus communis GN=RCOM_1082570 PE=4 SV=1
Gene Ontology
ID GO:0016788
description gdsl esterase lipase at3g48460-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_010174_140 0.0 - - Alpha-L-fucosidase 2 precursor, putative [Ricinus communis]
2 Hb_058526_010 0.1770982733 - - -
3 Hb_003166_040 0.1842531802 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Jatropha curcas]
4 Hb_127743_030 0.1844781462 - - amino acid transporter, putative [Ricinus communis]
5 Hb_017491_040 0.1883255792 - - PREDICTED: uncharacterized protein LOC105631348 [Jatropha curcas]
6 Hb_000220_170 0.1898504897 - - -
7 Hb_002374_110 0.1899045533 - - PREDICTED: uncharacterized protein LOC105638965 [Jatropha curcas]
8 Hb_002376_030 0.1912095054 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
9 Hb_111693_010 0.1914224574 - - hypothetical protein JCGZ_21650 [Jatropha curcas]
10 Hb_004055_080 0.1933475585 - - calmodulin binding protein, putative [Ricinus communis]
11 Hb_002027_310 0.1944799236 - - conserved hypothetical protein [Ricinus communis]
12 Hb_007432_050 0.1968850416 transcription factor TF Family: MYB PREDICTED: transcription factor MYB108 [Jatropha curcas]
13 Hb_001723_070 0.1971982276 - - PREDICTED: polygalacturonase At1g48100 [Jatropha curcas]
14 Hb_004021_100 0.2011696429 - - -
15 Hb_000288_140 0.2014210207 - - PREDICTED: putative cysteine-rich receptor-like protein kinase 35 [Jatropha curcas]
16 Hb_013652_010 0.2053798171 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_001609_080 0.2059181442 - - hypothetical protein POPTR_0017s05660g [Populus trichocarpa]
18 Hb_000556_140 0.2061178625 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 9 [Jatropha curcas]
19 Hb_003205_030 0.2097586488 - - Pectinesterase inhibitor, putative [Ricinus communis]
20 Hb_009778_050 0.2098749017 - - hypothetical protein JCGZ_08917 [Jatropha curcas]

Gene co-expression network

sample Hb_010174_140 Hb_010174_140 Hb_058526_010 Hb_058526_010 Hb_010174_140--Hb_058526_010 Hb_003166_040 Hb_003166_040 Hb_010174_140--Hb_003166_040 Hb_127743_030 Hb_127743_030 Hb_010174_140--Hb_127743_030 Hb_017491_040 Hb_017491_040 Hb_010174_140--Hb_017491_040 Hb_000220_170 Hb_000220_170 Hb_010174_140--Hb_000220_170 Hb_002374_110 Hb_002374_110 Hb_010174_140--Hb_002374_110 Hb_058526_010--Hb_003166_040 Hb_058526_010--Hb_127743_030 Hb_004055_080 Hb_004055_080 Hb_058526_010--Hb_004055_080 Hb_007747_030 Hb_007747_030 Hb_058526_010--Hb_007747_030 Hb_007483_030 Hb_007483_030 Hb_058526_010--Hb_007483_030 Hb_058526_010--Hb_002374_110 Hb_003166_040--Hb_127743_030 Hb_027288_010 Hb_027288_010 Hb_003166_040--Hb_027288_010 Hb_003166_040--Hb_007483_030 Hb_003166_040--Hb_002374_110 Hb_007432_050 Hb_007432_050 Hb_003166_040--Hb_007432_050 Hb_127743_030--Hb_002374_110 Hb_127743_030--Hb_007432_050 Hb_127743_030--Hb_027288_010 Hb_127743_030--Hb_007483_030 Hb_004021_100 Hb_004021_100 Hb_017491_040--Hb_004021_100 Hb_002042_200 Hb_002042_200 Hb_017491_040--Hb_002042_200 Hb_008705_040 Hb_008705_040 Hb_017491_040--Hb_008705_040 Hb_001623_400 Hb_001623_400 Hb_017491_040--Hb_001623_400 Hb_004452_080 Hb_004452_080 Hb_017491_040--Hb_004452_080 Hb_166813_010 Hb_166813_010 Hb_017491_040--Hb_166813_010 Hb_111693_010 Hb_111693_010 Hb_000220_170--Hb_111693_010 Hb_000220_170--Hb_004055_080 Hb_002553_100 Hb_002553_100 Hb_000220_170--Hb_002553_100 Hb_001789_010 Hb_001789_010 Hb_000220_170--Hb_001789_010 Hb_111985_120 Hb_111985_120 Hb_000220_170--Hb_111985_120 Hb_000220_170--Hb_058526_010 Hb_006919_010 Hb_006919_010 Hb_002374_110--Hb_006919_010 Hb_002374_110--Hb_007483_030 Hb_002374_110--Hb_027288_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0240995 0.0206663 0.0134255 0.00854222 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0842982 0

CAGE analysis