Hb_009193_050

Information

Type -
Description -
Location Contig9193: 23001-24776
Sequence    

Annotation

kegg
ID rcu:RCOM_1620780
description hypothetical protein
nr
ID XP_012068350.1
description PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067LB38
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_15716 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009193_050 0.0 - - PREDICTED: uncharacterized protein LOC105630961 [Jatropha curcas]
2 Hb_031194_030 0.0801447252 - - ribulose 1,5-bisphosphate carboxylase/oxygenase [Stackhousia minima]
3 Hb_002835_420 0.0871815779 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
4 Hb_007645_050 0.0880683673 - - acetyl-CoA carboxylase beta subunit [Hevea brasiliensis]
5 Hb_088080_010 0.0898783902 - - photosystem I P700 chlorophyll a apoprotein A1 [Matelea biflora]
6 Hb_002704_090 0.0918165269 - - cytochrome P450, putative [Ricinus communis]
7 Hb_007595_030 0.0922627402 - - psbA gene product (chloroplast) [Silene noctiflora]
8 Hb_154980_010 0.0951060879 - - photosystem I P700 chlorophyll A apoprotein A2 [Medicago truncatula]
9 Hb_002093_010 0.096638849 - - PREDICTED: non-symbiotic hemoglobin 2 [Jatropha curcas]
10 Hb_003120_090 0.0983074052 - - PREDICTED: uncharacterized protein LOC100264374 [Vitis vinifera]
11 Hb_000627_060 0.0990252905 - - -
12 Hb_003963_030 0.0990959116 - - psbB [Jatropha curcas]
13 Hb_005018_050 0.099301723 - - PREDICTED: licodione synthase-like [Jatropha curcas]
14 Hb_003144_040 0.1003771971 - - PREDICTED: terpene synthase 10-like [Jatropha curcas]
15 Hb_033623_030 0.1023005248 - - PREDICTED: isoprene synthase, chloroplastic-like isoform X1 [Jatropha curcas]
16 Hb_003407_050 0.10413212 - - UDP-glucuronosyltransferase, putative [Ricinus communis]
17 Hb_003688_030 0.1041961284 - - NADH dehydrogenase 2-like ORF 180
18 Hb_006435_020 0.1055202239 - - sugar transporter, putative [Ricinus communis]
19 Hb_007933_010 0.1058608927 - - ATP-binding cassette transporter, putative [Ricinus communis]
20 Hb_007741_060 0.1059875707 - - PREDICTED: putative lipid-binding protein At4g00165 [Jatropha curcas]

Gene co-expression network

sample Hb_009193_050 Hb_009193_050 Hb_031194_030 Hb_031194_030 Hb_009193_050--Hb_031194_030 Hb_002835_420 Hb_002835_420 Hb_009193_050--Hb_002835_420 Hb_007645_050 Hb_007645_050 Hb_009193_050--Hb_007645_050 Hb_088080_010 Hb_088080_010 Hb_009193_050--Hb_088080_010 Hb_002704_090 Hb_002704_090 Hb_009193_050--Hb_002704_090 Hb_007595_030 Hb_007595_030 Hb_009193_050--Hb_007595_030 Hb_031194_030--Hb_088080_010 Hb_005018_050 Hb_005018_050 Hb_031194_030--Hb_005018_050 Hb_031194_030--Hb_007595_030 Hb_003120_090 Hb_003120_090 Hb_031194_030--Hb_003120_090 Hb_003407_050 Hb_003407_050 Hb_031194_030--Hb_003407_050 Hb_031194_030--Hb_002704_090 Hb_154980_010 Hb_154980_010 Hb_002835_420--Hb_154980_010 Hb_106850_010 Hb_106850_010 Hb_002835_420--Hb_106850_010 Hb_104509_010 Hb_104509_010 Hb_002835_420--Hb_104509_010 Hb_002835_420--Hb_031194_030 Hb_126973_010 Hb_126973_010 Hb_002835_420--Hb_126973_010 Hb_006302_050 Hb_006302_050 Hb_002835_420--Hb_006302_050 Hb_003963_030 Hb_003963_030 Hb_007645_050--Hb_003963_030 Hb_007645_050--Hb_088080_010 Hb_007645_050--Hb_007595_030 Hb_007645_050--Hb_031194_030 Hb_007645_060 Hb_007645_060 Hb_007645_050--Hb_007645_060 Hb_007645_050--Hb_154980_010 Hb_088080_010--Hb_007595_030 Hb_088080_010--Hb_003963_030 Hb_088080_010--Hb_005018_050 Hb_088080_010--Hb_003120_090 Hb_002093_010 Hb_002093_010 Hb_002704_090--Hb_002093_010 Hb_000627_060 Hb_000627_060 Hb_002704_090--Hb_000627_060 Hb_002704_090--Hb_003120_090 Hb_002704_090--Hb_005018_050 Hb_007933_010 Hb_007933_010 Hb_002704_090--Hb_007933_010 Hb_007595_030--Hb_003963_030 Hb_007595_030--Hb_005018_050 Hb_007595_030--Hb_003407_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0133427 0.0132765 0.0700316 0.00977238 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 1.502

CAGE analysis