Hb_008959_020

Information

Type -
Description -
Location Contig8959: 32740-37495
Sequence    

Annotation

kegg
ID pxb:103961749
description nitric oxide synthase-interacting protein
nr
ID XP_009372652.1
description PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
swissprot
ID Q6NUH3
description Nitric oxide synthase-interacting protein OS=Xenopus laevis GN=nosip PE=2 SV=1
trembl
ID A0A067JLH3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21331 PE=4 SV=1
Gene Ontology
ID GO:0008270
description nitric oxide synthase-interacting

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61754: 32836-35945 , PASA_asmbl_61755: 33657-34045 , PASA_asmbl_61757: 38347-38490
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008959_020 0.0 - - PREDICTED: nitric oxide synthase-interacting protein [Pyrus x bretschneideri]
2 Hb_000003_190 0.0603056285 transcription factor TF Family: MYB-related PREDICTED: transcription factor DIVARICATA-like isoform X1 [Nelumbo nucifera]
3 Hb_001329_160 0.0650703946 - - PREDICTED: uncharacterized protein LOC105642679 isoform X1 [Jatropha curcas]
4 Hb_001546_080 0.0728111938 - - PREDICTED: transcription initiation factor TFIID subunit 12b isoform X1 [Jatropha curcas]
5 Hb_007765_110 0.0741288941 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
6 Hb_001080_230 0.0742250733 transcription factor TF Family: PHD PREDICTED: uncharacterized protein LOC105649979 [Jatropha curcas]
7 Hb_001266_100 0.0771618205 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
8 Hb_000318_250 0.0782623925 - - PREDICTED: uncharacterized protein LOC105634251 [Jatropha curcas]
9 Hb_001396_200 0.0797693057 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 4 isoform X1 [Jatropha curcas]
10 Hb_000976_310 0.0806567824 - - PREDICTED: protein EMSY-LIKE 3 isoform X1 [Jatropha curcas]
11 Hb_011491_010 0.0818622603 - - Protein YME1, putative [Ricinus communis]
12 Hb_001104_190 0.0855421333 - - PREDICTED: uncharacterized protein LOC105629451 [Jatropha curcas]
13 Hb_003030_060 0.0874592312 - - PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 2-like [Jatropha curcas]
14 Hb_007035_050 0.0878268592 - - PREDICTED: cleavage stimulating factor 64 [Jatropha curcas]
15 Hb_002872_040 0.0880853546 - - pumilio, putative [Ricinus communis]
16 Hb_000175_100 0.0886978264 - - protein kinase, putative [Ricinus communis]
17 Hb_004800_080 0.0888645387 - - PREDICTED: acidic leucine-rich nuclear phosphoprotein 32-related protein [Jatropha curcas]
18 Hb_005725_210 0.0904293824 - - PREDICTED: RNA-binding protein 1 [Jatropha curcas]
19 Hb_001614_060 0.090461221 - - hypothetical protein JCGZ_06918 [Jatropha curcas]
20 Hb_003370_030 0.0919689663 - - PREDICTED: uncharacterized protein LOC105635547 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008959_020 Hb_008959_020 Hb_000003_190 Hb_000003_190 Hb_008959_020--Hb_000003_190 Hb_001329_160 Hb_001329_160 Hb_008959_020--Hb_001329_160 Hb_001546_080 Hb_001546_080 Hb_008959_020--Hb_001546_080 Hb_007765_110 Hb_007765_110 Hb_008959_020--Hb_007765_110 Hb_001080_230 Hb_001080_230 Hb_008959_020--Hb_001080_230 Hb_001266_100 Hb_001266_100 Hb_008959_020--Hb_001266_100 Hb_000003_190--Hb_001080_230 Hb_000092_020 Hb_000092_020 Hb_000003_190--Hb_000092_020 Hb_003470_080 Hb_003470_080 Hb_000003_190--Hb_003470_080 Hb_002872_040 Hb_002872_040 Hb_000003_190--Hb_002872_040 Hb_000395_130 Hb_000395_130 Hb_000003_190--Hb_000395_130 Hb_001838_060 Hb_001838_060 Hb_001329_160--Hb_001838_060 Hb_000976_310 Hb_000976_310 Hb_001329_160--Hb_000976_310 Hb_001329_160--Hb_001080_230 Hb_001329_160--Hb_000395_130 Hb_001329_160--Hb_001546_080 Hb_000318_250 Hb_000318_250 Hb_001546_080--Hb_000318_250 Hb_000317_050 Hb_000317_050 Hb_001546_080--Hb_000317_050 Hb_003030_060 Hb_003030_060 Hb_001546_080--Hb_003030_060 Hb_000329_710 Hb_000329_710 Hb_001546_080--Hb_000329_710 Hb_006478_040 Hb_006478_040 Hb_001546_080--Hb_006478_040 Hb_005489_020 Hb_005489_020 Hb_001546_080--Hb_005489_020 Hb_003464_090 Hb_003464_090 Hb_007765_110--Hb_003464_090 Hb_007163_120 Hb_007163_120 Hb_007765_110--Hb_007163_120 Hb_000868_090 Hb_000868_090 Hb_007765_110--Hb_000868_090 Hb_033772_030 Hb_033772_030 Hb_007765_110--Hb_033772_030 Hb_003370_030 Hb_003370_030 Hb_007765_110--Hb_003370_030 Hb_011491_010 Hb_011491_010 Hb_007765_110--Hb_011491_010 Hb_001080_230--Hb_000092_020 Hb_001080_230--Hb_000395_130 Hb_001080_230--Hb_003470_080 Hb_001080_230--Hb_002872_040 Hb_001080_230--Hb_003030_060 Hb_000181_320 Hb_000181_320 Hb_001266_100--Hb_000181_320 Hb_001266_100--Hb_003370_030 Hb_001614_060 Hb_001614_060 Hb_001266_100--Hb_001614_060 Hb_001114_140 Hb_001114_140 Hb_001266_100--Hb_001114_140 Hb_001266_100--Hb_001329_160 Hb_001266_100--Hb_000003_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
7.36259 15.3812 4.42653 6.01034 8.4809 7.85958
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.09591 11.2494 6.29826 8.80101 7.76952

CAGE analysis