Hb_001114_140

Information

Type -
Description -
Location Contig1114: 156521-158272
Sequence    

Annotation

kegg
ID rcu:RCOM_0885510
description dnajc14 protein, putative
nr
ID XP_012069195.1
description PREDICTED: uncharacterized protein LOC105631631 [Jatropha curcas]
swissprot
ID O13633
description Uncharacterized J domain-containing protein C17A3.05c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pi041 PE=1 SV=1
trembl
ID A0A067L906
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24984 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001114_140 0.0 - - PREDICTED: uncharacterized protein LOC105631631 [Jatropha curcas]
2 Hb_003370_030 0.0552957048 - - PREDICTED: uncharacterized protein LOC105635547 isoform X2 [Jatropha curcas]
3 Hb_167498_010 0.0687530985 - - PREDICTED: WPP domain-interacting protein 1-like [Jatropha curcas]
4 Hb_001266_100 0.0720829702 - - PREDICTED: uncharacterized protein LOC105649131 [Jatropha curcas]
5 Hb_007163_120 0.0735441029 - - PREDICTED: COMPASS-like H3K4 histone methylase component WDR5A [Jatropha curcas]
6 Hb_001369_730 0.0737215171 - - F5O11.10, putative isoform 1 [Theobroma cacao]
7 Hb_000107_490 0.0742124629 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
8 Hb_002890_290 0.0758170525 - - PREDICTED: outer envelope protein 64, mitochondrial [Jatropha curcas]
9 Hb_001638_270 0.0758938396 - - PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X2 [Jatropha curcas]
10 Hb_000922_360 0.0762473614 - - -
11 Hb_007765_110 0.0787678644 - - PREDICTED: zinc finger CCCH domain-containing protein 40-like [Jatropha curcas]
12 Hb_000574_540 0.0797951529 - - ATP binding protein, putative [Ricinus communis]
13 Hb_001396_200 0.0798169825 transcription factor TF Family: CAMTA PREDICTED: calmodulin-binding transcription activator 4 isoform X1 [Jatropha curcas]
14 Hb_000329_470 0.0808110311 - - ccr4-not transcription complex, putative [Ricinus communis]
15 Hb_003464_090 0.0813452988 transcription factor TF Family: Trihelix PREDICTED: uncharacterized protein LOC105642342 [Jatropha curcas]
16 Hb_002872_040 0.0825702934 - - pumilio, putative [Ricinus communis]
17 Hb_000041_110 0.0828997391 - - PREDICTED: WW domain-binding protein 11 isoform X1 [Jatropha curcas]
18 Hb_000868_090 0.0829080223 transcription factor TF Family: ARID PREDICTED: AT-rich interactive domain-containing protein 4 [Jatropha curcas]
19 Hb_003158_010 0.0830912422 - - hypothetical protein JCGZ_17361 [Jatropha curcas]
20 Hb_000327_270 0.0833219108 - - PREDICTED: leukocyte receptor cluster member 8 homolog isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_001114_140 Hb_001114_140 Hb_003370_030 Hb_003370_030 Hb_001114_140--Hb_003370_030 Hb_167498_010 Hb_167498_010 Hb_001114_140--Hb_167498_010 Hb_001266_100 Hb_001266_100 Hb_001114_140--Hb_001266_100 Hb_007163_120 Hb_007163_120 Hb_001114_140--Hb_007163_120 Hb_001369_730 Hb_001369_730 Hb_001114_140--Hb_001369_730 Hb_000107_490 Hb_000107_490 Hb_001114_140--Hb_000107_490 Hb_003370_030--Hb_007163_120 Hb_005000_260 Hb_005000_260 Hb_003370_030--Hb_005000_260 Hb_033772_030 Hb_033772_030 Hb_003370_030--Hb_033772_030 Hb_003370_030--Hb_001266_100 Hb_003464_090 Hb_003464_090 Hb_003370_030--Hb_003464_090 Hb_167498_010--Hb_001369_730 Hb_003158_010 Hb_003158_010 Hb_167498_010--Hb_003158_010 Hb_001409_020 Hb_001409_020 Hb_167498_010--Hb_001409_020 Hb_000329_470 Hb_000329_470 Hb_167498_010--Hb_000329_470 Hb_000225_040 Hb_000225_040 Hb_167498_010--Hb_000225_040 Hb_007254_070 Hb_007254_070 Hb_167498_010--Hb_007254_070 Hb_000181_320 Hb_000181_320 Hb_001266_100--Hb_000181_320 Hb_001614_060 Hb_001614_060 Hb_001266_100--Hb_001614_060 Hb_001329_160 Hb_001329_160 Hb_001266_100--Hb_001329_160 Hb_000003_190 Hb_000003_190 Hb_001266_100--Hb_000003_190 Hb_007163_120--Hb_003464_090 Hb_007163_120--Hb_033772_030 Hb_011491_010 Hb_011491_010 Hb_007163_120--Hb_011491_010 Hb_007765_110 Hb_007765_110 Hb_007163_120--Hb_007765_110 Hb_024621_040 Hb_024621_040 Hb_007163_120--Hb_024621_040 Hb_001369_730--Hb_000329_470 Hb_001369_730--Hb_001409_020 Hb_001198_100 Hb_001198_100 Hb_001369_730--Hb_001198_100 Hb_000732_010 Hb_000732_010 Hb_001369_730--Hb_000732_010 Hb_004800_080 Hb_004800_080 Hb_001369_730--Hb_004800_080 Hb_000245_040 Hb_000245_040 Hb_000107_490--Hb_000245_040 Hb_000890_210 Hb_000890_210 Hb_000107_490--Hb_000890_210 Hb_000111_290 Hb_000111_290 Hb_000107_490--Hb_000111_290 Hb_010174_110 Hb_010174_110 Hb_000107_490--Hb_010174_110 Hb_000107_490--Hb_003370_030 Hb_004724_150 Hb_004724_150 Hb_000107_490--Hb_004724_150
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
20.4184 23.8392 10.3139 14.83 18.3897 14.6754
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
21.0128 14.1237 17.8513 21.9 15.2946

CAGE analysis