Hb_007304_070

Information

Type -
Description -
Location Contig7304: 81990-84220
Sequence    

Annotation

kegg
ID rcu:RCOM_0296600
description hypoxanthine-guanine phosphoribosyltransferase, putative (EC:2.4.2.8)
nr
ID XP_002527093.1
description hypoxanthine-guanine phosphoribosyltransferase, putative [Ricinus communis]
swissprot
ID Q839B2
description Hypoxanthine-guanine phosphoribosyltransferase OS=Enterococcus faecalis (strain ATCC 700802 / V583) GN=hpt PE=3 SV=1
trembl
ID B9SM74
description Hypoxanthine-guanine phosphoribosyltransferase, putative OS=Ricinus communis GN=RCOM_0296600 PE=4 SV=1
Gene Ontology
ID GO:0005737
description hypoxanthine-guanine phosphoribosyltransferase

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_55931: 82234-82366 , PASA_asmbl_55932: 82963-84189
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_007304_070 0.0 - - hypoxanthine-guanine phosphoribosyltransferase, putative [Ricinus communis]
2 Hb_000111_340 0.0695860088 - - peptidyl-prolyl cis-trans isomerase h, ppih, putative [Ricinus communis]
3 Hb_003053_030 0.0701335212 - - PREDICTED: transport and Golgi organization 2 homolog [Jatropha curcas]
4 Hb_000881_080 0.0725638827 - - conserved hypothetical protein [Ricinus communis]
5 Hb_001633_030 0.074537387 - - -
6 Hb_002431_050 0.0769564735 - - PREDICTED: probable protein phosphatase 2C 11 [Jatropha curcas]
7 Hb_000365_080 0.0775445109 - - PREDICTED: uncharacterized protein LOC105649037 [Jatropha curcas]
8 Hb_010672_060 0.0788988911 - - gaba(A) receptor-associated protein, putative [Ricinus communis]
9 Hb_000062_390 0.0791418059 - - PREDICTED: protein Iojap-related, mitochondrial [Jatropha curcas]
10 Hb_000905_180 0.0796092019 - - 60S ribosomal protein L31A [Hevea brasiliensis]
11 Hb_007416_020 0.0812933226 - - PREDICTED: uncharacterized protein At1g32220, chloroplastic [Cucumis sativus]
12 Hb_000181_300 0.0834748127 - - PREDICTED: uncharacterized protein LOC105650445 isoform X2 [Jatropha curcas]
13 Hb_000163_130 0.0839442983 - - hypothetical protein CICLE_v10022870mg [Citrus clementina]
14 Hb_002006_130 0.0856134557 - - PREDICTED: uncharacterized protein LOC105648712 [Jatropha curcas]
15 Hb_000364_030 0.0863366545 - - RNA binding protein, putative [Ricinus communis]
16 Hb_005211_190 0.0864619737 - - PREDICTED: uncharacterized protein LOC105641994 [Jatropha curcas]
17 Hb_002835_320 0.0867093023 - - 60S ribosomal protein L27B [Hevea brasiliensis]
18 Hb_003226_210 0.087633171 - - hypothetical protein PRUPE_ppa013414mg [Prunus persica]
19 Hb_026398_010 0.0889814494 - - hypothetical protein B456_010G132100 [Gossypium raimondii]
20 Hb_001155_040 0.0892134211 - - PREDICTED: cytochrome b-c1 complex subunit 8 [Eucalyptus grandis]

Gene co-expression network

sample Hb_007304_070 Hb_007304_070 Hb_000111_340 Hb_000111_340 Hb_007304_070--Hb_000111_340 Hb_003053_030 Hb_003053_030 Hb_007304_070--Hb_003053_030 Hb_000881_080 Hb_000881_080 Hb_007304_070--Hb_000881_080 Hb_001633_030 Hb_001633_030 Hb_007304_070--Hb_001633_030 Hb_002431_050 Hb_002431_050 Hb_007304_070--Hb_002431_050 Hb_000365_080 Hb_000365_080 Hb_007304_070--Hb_000365_080 Hb_007944_040 Hb_007944_040 Hb_000111_340--Hb_007944_040 Hb_000334_210 Hb_000334_210 Hb_000111_340--Hb_000334_210 Hb_010672_060 Hb_010672_060 Hb_000111_340--Hb_010672_060 Hb_002588_010 Hb_002588_010 Hb_000111_340--Hb_002588_010 Hb_003656_070 Hb_003656_070 Hb_000111_340--Hb_003656_070 Hb_001191_090 Hb_001191_090 Hb_003053_030--Hb_001191_090 Hb_000181_300 Hb_000181_300 Hb_003053_030--Hb_000181_300 Hb_148200_010 Hb_148200_010 Hb_003053_030--Hb_148200_010 Hb_000364_030 Hb_000364_030 Hb_003053_030--Hb_000364_030 Hb_004156_040 Hb_004156_040 Hb_003053_030--Hb_004156_040 Hb_003994_040 Hb_003994_040 Hb_003053_030--Hb_003994_040 Hb_032260_030 Hb_032260_030 Hb_000881_080--Hb_032260_030 Hb_000905_180 Hb_000905_180 Hb_000881_080--Hb_000905_180 Hb_001016_090 Hb_001016_090 Hb_000881_080--Hb_001016_090 Hb_000236_150 Hb_000236_150 Hb_000881_080--Hb_000236_150 Hb_001780_050 Hb_001780_050 Hb_000881_080--Hb_001780_050 Hb_001633_030--Hb_000181_300 Hb_001633_030--Hb_002431_050 Hb_001633_030--Hb_010672_060 Hb_153112_030 Hb_153112_030 Hb_001633_030--Hb_153112_030 Hb_004459_040 Hb_004459_040 Hb_001633_030--Hb_004459_040 Hb_002431_050--Hb_010672_060 Hb_002830_020 Hb_002830_020 Hb_002431_050--Hb_002830_020 Hb_003893_050 Hb_003893_050 Hb_002431_050--Hb_003893_050 Hb_000283_110 Hb_000283_110 Hb_002431_050--Hb_000283_110 Hb_007416_020 Hb_007416_020 Hb_002431_050--Hb_007416_020 Hb_029584_060 Hb_029584_060 Hb_002431_050--Hb_029584_060 Hb_005211_190 Hb_005211_190 Hb_000365_080--Hb_005211_190 Hb_000365_080--Hb_007416_020 Hb_007575_070 Hb_007575_070 Hb_000365_080--Hb_007575_070 Hb_001424_020 Hb_001424_020 Hb_000365_080--Hb_001424_020 Hb_002107_120 Hb_002107_120 Hb_000365_080--Hb_002107_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
11.3915 7.10078 4.87523 11.9344 8.27116 11.1711
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
36.0888 53.7289 21.5902 10.4762 7.6261

CAGE analysis