Hb_006901_020

Information

Type -
Description -
Location Contig6901: 11873-14003
Sequence    

Annotation

kegg
ID rcu:RCOM_1681680
description Tellurite resistance protein tehA, putative
nr
ID XP_012087058.1
description PREDICTED: guard cell S-type anion channel SLAC1 [Jatropha curcas]
swissprot
ID Q9LD83
description Guard cell S-type anion channel SLAC1 OS=Arabidopsis thaliana GN=SLAC1 PE=1 SV=1
trembl
ID A0A067JNV2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20723 PE=4 SV=1
Gene Ontology
ID GO:0005623
description guard cell s-type anion channel slac1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_006901_020 0.0 - - PREDICTED: guard cell S-type anion channel SLAC1 [Jatropha curcas]
2 Hb_000039_210 0.0590010034 - - PREDICTED: uncharacterized protein LOC105649449 [Jatropha curcas]
3 Hb_025325_010 0.0803650653 - - hypothetical protein JCGZ_09061 [Jatropha curcas]
4 Hb_005000_120 0.0822929281 transcription factor TF Family: C2C2-GATA hypothetical protein RCOM_1046780 [Ricinus communis]
5 Hb_011068_010 0.0862358956 - - PREDICTED: alkane hydroxylase MAH1-like [Jatropha curcas]
6 Hb_003337_080 0.0887917617 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
7 Hb_001287_070 0.0888182253 - - latex plastidic aldolase-like protein [Hevea brasiliensis]
8 Hb_001046_060 0.091902894 - - PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 7-like [Fragaria vesca subsp. vesca]
9 Hb_001621_090 0.0958677568 - - hypothetical protein POPTR_0010s20810g [Populus trichocarpa]
10 Hb_000805_080 0.0959161272 - - PREDICTED: abscisic acid 8'-hydroxylase 2 isoform X2 [Jatropha curcas]
11 Hb_000010_380 0.0985780695 - - hypothetical protein CICLE_v10020897mg [Citrus clementina]
12 Hb_001338_130 0.0986925302 - - hypothetical protein MTR_4g129340 [Medicago truncatula]
13 Hb_160045_010 0.0994034504 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005605_020 0.1001320586 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Jatropha curcas]
15 Hb_028227_050 0.10392587 - - PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Jatropha curcas]
16 Hb_000450_050 0.1040151236 - - PREDICTED: benzyl alcohol O-benzoyltransferase-like [Jatropha curcas]
17 Hb_001671_130 0.1058952645 - - PREDICTED: protein NUCLEAR FUSION DEFECTIVE 4-like [Jatropha curcas]
18 Hb_000640_090 0.1105329961 - - PREDICTED: calvin cycle protein CP12-2, chloroplastic-like [Jatropha curcas]
19 Hb_009663_030 0.1112923199 - - Blue copper protein precursor, putative [Ricinus communis]
20 Hb_107373_010 0.1127917505 - - PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Jatropha curcas]

Gene co-expression network

sample Hb_006901_020 Hb_006901_020 Hb_000039_210 Hb_000039_210 Hb_006901_020--Hb_000039_210 Hb_025325_010 Hb_025325_010 Hb_006901_020--Hb_025325_010 Hb_005000_120 Hb_005000_120 Hb_006901_020--Hb_005000_120 Hb_011068_010 Hb_011068_010 Hb_006901_020--Hb_011068_010 Hb_003337_080 Hb_003337_080 Hb_006901_020--Hb_003337_080 Hb_001287_070 Hb_001287_070 Hb_006901_020--Hb_001287_070 Hb_000039_210--Hb_005000_120 Hb_000039_210--Hb_001287_070 Hb_001046_060 Hb_001046_060 Hb_000039_210--Hb_001046_060 Hb_000039_210--Hb_011068_010 Hb_000111_460 Hb_000111_460 Hb_000039_210--Hb_000111_460 Hb_001621_090 Hb_001621_090 Hb_025325_010--Hb_001621_090 Hb_160045_010 Hb_160045_010 Hb_025325_010--Hb_160045_010 Hb_025325_010--Hb_005000_120 Hb_006665_020 Hb_006665_020 Hb_025325_010--Hb_006665_020 Hb_001338_130 Hb_001338_130 Hb_025325_010--Hb_001338_130 Hb_005000_120--Hb_001046_060 Hb_005000_120--Hb_001287_070 Hb_005000_120--Hb_001621_090 Hb_005000_120--Hb_011068_010 Hb_005000_120--Hb_000111_460 Hb_011068_010--Hb_003337_080 Hb_011068_010--Hb_001287_070 Hb_005605_020 Hb_005605_020 Hb_011068_010--Hb_005605_020 Hb_011068_010--Hb_001046_060 Hb_000805_080 Hb_000805_080 Hb_011068_010--Hb_000805_080 Hb_003337_080--Hb_000805_080 Hb_003337_080--Hb_005605_020 Hb_003337_080--Hb_001046_060 Hb_000640_090 Hb_000640_090 Hb_003337_080--Hb_000640_090 Hb_003337_080--Hb_001287_070 Hb_001287_070--Hb_001046_060 Hb_003090_050 Hb_003090_050 Hb_001287_070--Hb_003090_050 Hb_001287_070--Hb_000805_080 Hb_000010_380 Hb_000010_380 Hb_001287_070--Hb_000010_380
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.09583 0.972524 0.116677 0 0.023201
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 2.40257

CAGE analysis