Hb_005288_040

Information

Type -
Description -
Location Contig5288: 12355-13457
Sequence    

Annotation

kegg
ID rcu:RCOM_0609790
description DUF26 domain-containing protein 2 precursor, putative
nr
ID XP_002521995.1
description DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
swissprot
ID Q6NM73
description Cysteine-rich repeat secretory protein 3 OS=Arabidopsis thaliana GN=CRRSP3 PE=1 SV=1
trembl
ID B9S7M6
description DUF26 domain-containing protein 2, putative OS=Ricinus communis GN=RCOM_0609790 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_005288_040 0.0 - - DUF26 domain-containing protein 2 precursor, putative [Ricinus communis]
2 Hb_003071_060 0.2170603165 - - PREDICTED: beta-galactosidase 15-like [Jatropha curcas]
3 Hb_000025_020 0.2183050737 - - PREDICTED: cytochrome P450 71B34-like [Jatropha curcas]
4 Hb_000220_160 0.2221394795 - - hypothetical protein B456_003G184800 [Gossypium raimondii]
5 Hb_006478_180 0.2279612065 - - Nonspecific lipid-transfer protein precursor, putative [Ricinus communis]
6 Hb_132880_030 0.2454952705 - - hypothetical protein JCGZ_10325 [Jatropha curcas]
7 Hb_002325_020 0.2473190449 - - zinc finger protein, putative [Ricinus communis]
8 Hb_027445_090 0.2479249706 - - oleosin 18.2 kDa-like [Jatropha curcas]
9 Hb_001045_050 0.2556292452 transcription factor TF Family: WRKY hypothetical protein POPTR_0001s33560g [Populus trichocarpa]
10 Hb_032631_010 0.2594421102 - - PREDICTED: uncharacterized protein LOC105638774 [Jatropha curcas]
11 Hb_005539_160 0.2653379342 - - PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Jatropha curcas]
12 Hb_000597_110 0.2655067348 - - PREDICTED: VQ motif-containing protein 22-like [Jatropha curcas]
13 Hb_006452_050 0.2657131664 - - PREDICTED: GABA transporter 1-like [Jatropha curcas]
14 Hb_000010_120 0.2686005733 - - PREDICTED: cytochrome P450 71A26-like [Jatropha curcas]
15 Hb_005511_050 0.2699790664 - - hypothetical protein POPTR_0008s04130g [Populus trichocarpa]
16 Hb_000699_170 0.2712072876 - - myosin XI, putative [Ricinus communis]
17 Hb_011382_030 0.2725000121 - - Dehydration-responsive protein RD22 precursor, putative [Ricinus communis]
18 Hb_002758_040 0.2727227015 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_003010_040 0.2729440536 - - hypothetical protein AALP_AA7G248200 [Arabis alpina]
20 Hb_037960_010 0.274874721 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]

Gene co-expression network

sample Hb_005288_040 Hb_005288_040 Hb_003071_060 Hb_003071_060 Hb_005288_040--Hb_003071_060 Hb_000025_020 Hb_000025_020 Hb_005288_040--Hb_000025_020 Hb_000220_160 Hb_000220_160 Hb_005288_040--Hb_000220_160 Hb_006478_180 Hb_006478_180 Hb_005288_040--Hb_006478_180 Hb_132880_030 Hb_132880_030 Hb_005288_040--Hb_132880_030 Hb_002325_020 Hb_002325_020 Hb_005288_040--Hb_002325_020 Hb_003071_060--Hb_002325_020 Hb_003071_060--Hb_006478_180 Hb_006452_050 Hb_006452_050 Hb_003071_060--Hb_006452_050 Hb_112082_030 Hb_112082_030 Hb_003071_060--Hb_112082_030 Hb_002960_170 Hb_002960_170 Hb_003071_060--Hb_002960_170 Hb_003071_060--Hb_132880_030 Hb_000025_020--Hb_002325_020 Hb_005539_160 Hb_005539_160 Hb_000025_020--Hb_005539_160 Hb_000010_120 Hb_000010_120 Hb_000025_020--Hb_000010_120 Hb_000556_110 Hb_000556_110 Hb_000025_020--Hb_000556_110 Hb_000025_020--Hb_003071_060 Hb_000025_020--Hb_006478_180 Hb_000220_160--Hb_132880_030 Hb_000597_110 Hb_000597_110 Hb_000220_160--Hb_000597_110 Hb_032631_010 Hb_032631_010 Hb_000220_160--Hb_032631_010 Hb_002874_080 Hb_002874_080 Hb_000220_160--Hb_002874_080 Hb_005511_050 Hb_005511_050 Hb_000220_160--Hb_005511_050 Hb_031862_240 Hb_031862_240 Hb_000220_160--Hb_031862_240 Hb_003538_020 Hb_003538_020 Hb_006478_180--Hb_003538_020 Hb_002758_040 Hb_002758_040 Hb_006478_180--Hb_002758_040 Hb_006478_180--Hb_132880_030 Hb_006478_180--Hb_112082_030 Hb_006478_180--Hb_005511_050 Hb_006478_180--Hb_000010_120 Hb_132880_030--Hb_005511_050 Hb_000251_100 Hb_000251_100 Hb_132880_030--Hb_000251_100 Hb_001080_310 Hb_001080_310 Hb_132880_030--Hb_001080_310 Hb_132880_030--Hb_112082_030 Hb_002325_020--Hb_000010_120 Hb_002325_020--Hb_006478_180 Hb_003428_100 Hb_003428_100 Hb_002325_020--Hb_003428_100 Hb_011382_030 Hb_011382_030 Hb_002325_020--Hb_011382_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0309426 0.156466 0.0233297 0 0 0.0656894
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.112071 0 0.885855 0

CAGE analysis