Hb_003205_030

Information

Type -
Description -
Location Contig3205: 33107-35001
Sequence    

Annotation

kegg
ID rcu:RCOM_1178850
description Pectinesterase inhibitor, putative
nr
ID XP_002523111.1
description Pectinesterase inhibitor, putative [Ricinus communis]
swissprot
ID Q8GT41
description Putative invertase inhibitor OS=Platanus acerifolia PE=1 SV=1
trembl
ID B9SAU2
description Pectinesterase inhibitor, putative OS=Ricinus communis GN=RCOM_1178850 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_003205_030 0.0 - - Pectinesterase inhibitor, putative [Ricinus communis]
2 Hb_000556_140 0.1021791184 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 9 [Jatropha curcas]
3 Hb_004544_070 0.1107029984 - - unnamed protein product [Vitis vinifera]
4 Hb_002232_400 0.1220909212 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH25-like [Jatropha curcas]
5 Hb_002749_070 0.1229628362 - - PREDICTED: uncharacterized protein LOC105635941 [Jatropha curcas]
6 Hb_006006_070 0.123995561 - - UDP-glucosyltransferase, putative [Ricinus communis]
7 Hb_000438_190 0.1303470301 - - PREDICTED: peroxidase 4-like [Jatropha curcas]
8 Hb_004445_090 0.1355291631 - - conserved hypothetical protein [Ricinus communis]
9 Hb_032050_050 0.136403575 - - PREDICTED: peroxidase 12-like [Jatropha curcas]
10 Hb_002232_370 0.1377110392 - - PREDICTED: receptor-like protein kinase HAIKU2 [Jatropha curcas]
11 Hb_000245_140 0.1394463517 - - PREDICTED: CASP-like protein 3A1 [Jatropha curcas]
12 Hb_002110_270 0.1402616843 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH96 [Jatropha curcas]
13 Hb_000025_740 0.1424134814 - - PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Jatropha curcas]
14 Hb_000441_170 0.1439143638 - - PREDICTED: uncharacterized protein LOC105636851 [Jatropha curcas]
15 Hb_131864_020 0.1458903875 - - PREDICTED: anthocyanidin reductase [Jatropha curcas]
16 Hb_148914_010 0.1467158084 - - glutathione s-transferase, putative [Ricinus communis]
17 Hb_003786_060 0.1467421222 - - PREDICTED: transmembrane protein 220 [Jatropha curcas]
18 Hb_011145_020 0.1469783922 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
19 Hb_004324_200 0.1486565706 - - PREDICTED: transcription factor TRY-like [Populus euphratica]
20 Hb_076895_020 0.1493016256 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_003205_030 Hb_003205_030 Hb_000556_140 Hb_000556_140 Hb_003205_030--Hb_000556_140 Hb_004544_070 Hb_004544_070 Hb_003205_030--Hb_004544_070 Hb_002232_400 Hb_002232_400 Hb_003205_030--Hb_002232_400 Hb_002749_070 Hb_002749_070 Hb_003205_030--Hb_002749_070 Hb_006006_070 Hb_006006_070 Hb_003205_030--Hb_006006_070 Hb_000438_190 Hb_000438_190 Hb_003205_030--Hb_000438_190 Hb_000441_170 Hb_000441_170 Hb_000556_140--Hb_000441_170 Hb_000556_140--Hb_002232_400 Hb_000556_140--Hb_006006_070 Hb_000288_140 Hb_000288_140 Hb_000556_140--Hb_000288_140 Hb_032050_050 Hb_032050_050 Hb_000556_140--Hb_032050_050 Hb_004544_070--Hb_002749_070 Hb_164283_010 Hb_164283_010 Hb_004544_070--Hb_164283_010 Hb_018591_010 Hb_018591_010 Hb_004544_070--Hb_018591_010 Hb_004544_070--Hb_000438_190 Hb_011145_020 Hb_011145_020 Hb_004544_070--Hb_011145_020 Hb_006637_040 Hb_006637_040 Hb_004544_070--Hb_006637_040 Hb_002232_400--Hb_006006_070 Hb_002232_400--Hb_000441_170 Hb_076895_020 Hb_076895_020 Hb_002232_400--Hb_076895_020 Hb_002232_370 Hb_002232_370 Hb_002232_400--Hb_002232_370 Hb_002900_070 Hb_002900_070 Hb_002232_400--Hb_002900_070 Hb_002232_400--Hb_000438_190 Hb_002749_070--Hb_164283_010 Hb_002749_070--Hb_011145_020 Hb_000025_740 Hb_000025_740 Hb_002749_070--Hb_000025_740 Hb_002749_070--Hb_018591_010 Hb_002749_070--Hb_000438_190 Hb_002110_270 Hb_002110_270 Hb_006006_070--Hb_002110_270 Hb_006006_070--Hb_076895_020 Hb_000758_030 Hb_000758_030 Hb_006006_070--Hb_000758_030 Hb_000539_080 Hb_000539_080 Hb_006006_070--Hb_000539_080 Hb_006006_070--Hb_000441_170 Hb_148914_010 Hb_148914_010 Hb_000438_190--Hb_148914_010 Hb_000438_190--Hb_002232_370 Hb_000438_190--Hb_011145_020 Hb_010407_120 Hb_010407_120 Hb_000438_190--Hb_010407_120
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.642043 0.511335 0.843296 0.114703 0.051499
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 5.15826 0.132796

CAGE analysis