Hb_002417_030

Information

Type -
Description -
Location Contig2417: 29422-30614
Sequence    

Annotation

kegg
ID rcu:RCOM_0291950
description purine transporter, putative
nr
ID XP_012069191.1
description PREDICTED: purine permease 3-like [Jatropha curcas]
swissprot
ID Q9FZ95
description Purine permease 3 OS=Arabidopsis thaliana GN=PUP3 PE=2 SV=1
trembl
ID A0A067KXR2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24941 PE=4 SV=1
Gene Ontology
ID GO:0016021
description purine permease 3-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002417_030 0.0 - - PREDICTED: purine permease 3-like [Jatropha curcas]
2 Hb_000625_110 0.1570141077 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
3 Hb_012055_100 0.2186979601 - - heat shock protein 70 (HSP70)-interacting protein, putative [Ricinus communis]
4 Hb_006198_170 0.222844605 - - PREDICTED: serine/threonine-protein kinase At3g07070-like [Jatropha curcas]
5 Hb_038758_010 0.224036171 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
6 Hb_000877_090 0.2241475094 - - allergenic-related protein Pt2L4 [Manihot esculenta]
7 Hb_000142_020 0.2275874067 transcription factor TF Family: NAC NAC domain-containing protein, putative [Ricinus communis]
8 Hb_000260_320 0.2314447991 - - PREDICTED: uncharacterized protein LOC105649058 [Jatropha curcas]
9 Hb_001318_130 0.2360869781 - - PREDICTED: short-chain dehydrogenase reductase 3b-like [Populus euphratica]
10 Hb_030399_010 0.2362361877 - - PREDICTED: chaperone protein dnaJ 11, chloroplastic [Jatropha curcas]
11 Hb_031862_260 0.2381527414 - - conserved hypothetical protein [Ricinus communis]
12 Hb_011689_140 0.2425126907 - - PREDICTED: probable prolyl 4-hydroxylase 4 [Jatropha curcas]
13 Hb_001545_220 0.2428281624 - - hypothetical protein POPTR_0002s06170g [Populus trichocarpa]
14 Hb_005157_010 0.2477502965 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61370 [Jatropha curcas]
15 Hb_003504_040 0.2481678869 - - PREDICTED: phosphoenolpyruvate carboxylase kinase 2-like [Jatropha curcas]
16 Hb_128912_010 0.2492935569 - - PREDICTED: probable disease resistance protein At4g27220 [Jatropha curcas]
17 Hb_002217_440 0.2559533308 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
18 Hb_046117_050 0.2567122695 transcription factor TF Family: C2H2 hypothetical protein POPTR_0009s14590g [Populus trichocarpa]
19 Hb_005396_100 0.2577552085 - - conserved hypothetical protein [Ricinus communis]
20 Hb_150643_010 0.2603202727 - - lipid binding protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_002417_030 Hb_002417_030 Hb_000625_110 Hb_000625_110 Hb_002417_030--Hb_000625_110 Hb_012055_100 Hb_012055_100 Hb_002417_030--Hb_012055_100 Hb_006198_170 Hb_006198_170 Hb_002417_030--Hb_006198_170 Hb_038758_010 Hb_038758_010 Hb_002417_030--Hb_038758_010 Hb_000877_090 Hb_000877_090 Hb_002417_030--Hb_000877_090 Hb_000142_020 Hb_000142_020 Hb_002417_030--Hb_000142_020 Hb_000625_110--Hb_038758_010 Hb_000625_110--Hb_000142_020 Hb_003100_010 Hb_003100_010 Hb_000625_110--Hb_003100_010 Hb_000625_110--Hb_006198_170 Hb_011689_140 Hb_011689_140 Hb_000625_110--Hb_011689_140 Hb_000260_320 Hb_000260_320 Hb_012055_100--Hb_000260_320 Hb_012055_100--Hb_000877_090 Hb_046117_050 Hb_046117_050 Hb_012055_100--Hb_046117_050 Hb_000532_060 Hb_000532_060 Hb_012055_100--Hb_000532_060 Hb_001487_020 Hb_001487_020 Hb_012055_100--Hb_001487_020 Hb_150643_010 Hb_150643_010 Hb_012055_100--Hb_150643_010 Hb_006616_050 Hb_006616_050 Hb_006198_170--Hb_006616_050 Hb_000233_060 Hb_000233_060 Hb_006198_170--Hb_000233_060 Hb_002217_440 Hb_002217_440 Hb_006198_170--Hb_002217_440 Hb_066262_020 Hb_066262_020 Hb_006198_170--Hb_066262_020 Hb_004652_050 Hb_004652_050 Hb_006198_170--Hb_004652_050 Hb_066262_010 Hb_066262_010 Hb_006198_170--Hb_066262_010 Hb_038758_010--Hb_000142_020 Hb_038758_010--Hb_000877_090 Hb_038758_010--Hb_002217_440 Hb_001810_010 Hb_001810_010 Hb_038758_010--Hb_001810_010 Hb_038758_010--Hb_012055_100 Hb_000877_090--Hb_000260_320 Hb_002019_030 Hb_002019_030 Hb_000877_090--Hb_002019_030 Hb_003376_340 Hb_003376_340 Hb_000877_090--Hb_003376_340 Hb_000877_090--Hb_000532_060 Hb_000877_090--Hb_046117_050 Hb_000142_020--Hb_002217_440 Hb_000142_020--Hb_000877_090 Hb_004488_010 Hb_004488_010 Hb_000142_020--Hb_004488_010 Hb_000142_020--Hb_001810_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.152196 1.495 0 0.0618522 0.0237837 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.137346 0 0.627797 0

CAGE analysis