Hb_002311_170

Information

Type -
Description -
Location Contig2311: 88298-89170
Sequence    

Annotation

kegg
ID egr:104426695
description BTB/POZ and MATH domain-containing protein 2-like
nr
ID XP_010038132.1
description PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Eucalyptus grandis]
swissprot
ID Q9M8J9
description BTB/POZ and MATH domain-containing protein 2 OS=Arabidopsis thaliana GN=BPM2 PE=1 SV=1
trembl
ID A0A059A7A1
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_K03404 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_002311_170 0.0 - - PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Eucalyptus grandis]
2 Hb_009813_080 0.01689357 - - hypothetical protein CISIN_1g045991mg [Citrus sinensis]
3 Hb_008479_020 0.2135681695 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
4 Hb_001085_100 0.225346626 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
5 Hb_003960_020 0.2791696646 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
6 Hb_003052_230 0.2792124729 - - conserved hypothetical protein [Ricinus communis]
7 Hb_011077_020 0.2969277579 - - kinase, putative [Ricinus communis]
8 Hb_001832_020 0.3104584543 - - PREDICTED: uncharacterized protein LOC104584029 [Brachypodium distachyon]
9 Hb_008289_050 0.3107773594 - - hypothetical protein B456_001G045900 [Gossypium raimondii]
10 Hb_001703_110 0.3132077433 - - PREDICTED: putative ribonuclease H protein At1g65750 [Malus domestica]
11 Hb_001798_020 0.3145919964 - - PREDICTED: uncharacterized protein LOC104594032 [Nelumbo nucifera]
12 Hb_001104_050 0.3224165632 - - -
13 Hb_000084_170 0.3229059885 - - conserved hypothetical protein [Ricinus communis]
14 Hb_021943_030 0.3297158546 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
15 Hb_007101_290 0.3349713786 transcription factor TF Family: C2H2 conserved hypothetical protein [Ricinus communis]
16 Hb_116293_020 0.3439841447 - - Uncharacterized protein TCM_043787 [Theobroma cacao]
17 Hb_005520_020 0.3440075132 - - hypothetical protein EUGRSUZ_G03336 [Eucalyptus grandis]
18 Hb_009449_010 0.3457523298 - - Serine/threonine-protein kinase HT1 [Gossypium arboreum]
19 Hb_049415_010 0.3462432449 - - -
20 Hb_001720_060 0.3498643886 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 55-like [Jatropha curcas]

Gene co-expression network

sample Hb_002311_170 Hb_002311_170 Hb_009813_080 Hb_009813_080 Hb_002311_170--Hb_009813_080 Hb_008479_020 Hb_008479_020 Hb_002311_170--Hb_008479_020 Hb_001085_100 Hb_001085_100 Hb_002311_170--Hb_001085_100 Hb_003960_020 Hb_003960_020 Hb_002311_170--Hb_003960_020 Hb_003052_230 Hb_003052_230 Hb_002311_170--Hb_003052_230 Hb_011077_020 Hb_011077_020 Hb_002311_170--Hb_011077_020 Hb_009813_080--Hb_008479_020 Hb_009813_080--Hb_001085_100 Hb_009813_080--Hb_003052_230 Hb_009813_080--Hb_003960_020 Hb_009813_080--Hb_011077_020 Hb_008479_020--Hb_001085_100 Hb_001832_020 Hb_001832_020 Hb_008479_020--Hb_001832_020 Hb_008479_020--Hb_003052_230 Hb_027472_230 Hb_027472_230 Hb_008479_020--Hb_027472_230 Hb_001085_100--Hb_001832_020 Hb_001856_090 Hb_001856_090 Hb_001085_100--Hb_001856_090 Hb_001085_100--Hb_027472_230 Hb_015220_010 Hb_015220_010 Hb_003960_020--Hb_015220_010 Hb_007101_290 Hb_007101_290 Hb_003960_020--Hb_007101_290 Hb_001703_110 Hb_001703_110 Hb_003960_020--Hb_001703_110 Hb_001729_040 Hb_001729_040 Hb_003960_020--Hb_001729_040 Hb_000892_020 Hb_000892_020 Hb_003960_020--Hb_000892_020 Hb_083103_030 Hb_083103_030 Hb_003052_230--Hb_083103_030 Hb_103832_030 Hb_103832_030 Hb_003052_230--Hb_103832_030 Hb_172503_010 Hb_172503_010 Hb_003052_230--Hb_172503_010 Hb_001995_020 Hb_001995_020 Hb_003052_230--Hb_001995_020 Hb_115472_010 Hb_115472_010 Hb_003052_230--Hb_115472_010 Hb_004460_050 Hb_004460_050 Hb_011077_020--Hb_004460_050 Hb_000868_100 Hb_000868_100 Hb_011077_020--Hb_000868_100 Hb_000772_060 Hb_000772_060 Hb_011077_020--Hb_000772_060 Hb_000671_170 Hb_000671_170 Hb_011077_020--Hb_000671_170 Hb_002211_040 Hb_002211_040 Hb_011077_020--Hb_002211_040 Hb_001113_030 Hb_001113_030 Hb_011077_020--Hb_001113_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.109993 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.190118 0 0.0833583 0

CAGE analysis