Hb_001995_020

Information

Type -
Description -
Location Contig1995: 16477-16830
Sequence    

Annotation

kegg
ID rcu:RCOM_0554610
description (iso)eugenol O-methyltransferase, putative (EC:2.1.1.146)
nr
ID XP_011002666.1
description PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
swissprot
ID B6VJS4
description Trans-resveratrol di-O-methyltransferase OS=Vitis vinifera GN=ROMT PE=1 SV=2
trembl
ID B9SGP3
description (Iso)eugenol O-methyltransferase, putative OS=Ricinus communis GN=RCOM_0554610 PE=4 SV=1
Gene Ontology
ID GO:0046983
description trans-resveratrol di-o-methyltransferase-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001995_020 0.0 - - PREDICTED: trans-resveratrol di-O-methyltransferase-like [Populus euphratica]
2 Hb_002740_020 0.0658590357 - - -
3 Hb_115472_010 0.0659257729 - - -
4 Hb_022137_030 0.0666125794 - - PREDICTED: RING-H2 finger protein ATL66 [Jatropha curcas]
5 Hb_172503_010 0.0683467213 - - PREDICTED: uncharacterized protein LOC105647154 [Jatropha curcas]
6 Hb_103832_030 0.0685644926 - - PREDICTED: uncharacterized protein LOC105795045 [Gossypium raimondii]
7 Hb_083103_030 0.0697303334 - - putative retrotransposon protein [Malus domestica]
8 Hb_036790_010 0.0928594299 - - PREDICTED: GDSL esterase/lipase 1-like [Jatropha curcas]
9 Hb_001369_280 0.1080087817 - - PREDICTED: pentatricopeptide repeat-containing protein At5g64320, mitochondrial-like isoform X3 [Solanum tuberosum]
10 Hb_000496_090 0.1181237252 - - PREDICTED: inhibitor of trypsin and hageman factor-like [Gossypium raimondii]
11 Hb_012368_060 0.1459054498 - - -
12 Hb_011457_060 0.1462725011 - - PREDICTED: uncharacterized protein LOC105649957 [Jatropha curcas]
13 Hb_001999_110 0.1471730116 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Populus euphratica]
14 Hb_000635_120 0.1472760165 - - -
15 Hb_035492_010 0.1504385083 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
16 Hb_010267_010 0.1694095187 - - -
17 Hb_010120_010 0.1702192989 - - PREDICTED: uncharacterized protein LOC105634374 [Jatropha curcas]
18 Hb_001369_330 0.1708227814 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004881_110 0.1708895433 - - -
20 Hb_000265_180 0.1725458503 - - Alpha/beta-Hydrolases superfamily protein, putative [Theobroma cacao]

Gene co-expression network

sample Hb_001995_020 Hb_001995_020 Hb_002740_020 Hb_002740_020 Hb_001995_020--Hb_002740_020 Hb_115472_010 Hb_115472_010 Hb_001995_020--Hb_115472_010 Hb_022137_030 Hb_022137_030 Hb_001995_020--Hb_022137_030 Hb_172503_010 Hb_172503_010 Hb_001995_020--Hb_172503_010 Hb_103832_030 Hb_103832_030 Hb_001995_020--Hb_103832_030 Hb_083103_030 Hb_083103_030 Hb_001995_020--Hb_083103_030 Hb_002740_020--Hb_115472_010 Hb_002740_020--Hb_022137_030 Hb_002740_020--Hb_172503_010 Hb_002740_020--Hb_103832_030 Hb_002740_020--Hb_083103_030 Hb_036790_010 Hb_036790_010 Hb_002740_020--Hb_036790_010 Hb_115472_010--Hb_022137_030 Hb_115472_010--Hb_172503_010 Hb_115472_010--Hb_103832_030 Hb_115472_010--Hb_083103_030 Hb_022137_030--Hb_172503_010 Hb_022137_030--Hb_103832_030 Hb_022137_030--Hb_083103_030 Hb_022137_030--Hb_036790_010 Hb_172503_010--Hb_103832_030 Hb_172503_010--Hb_083103_030 Hb_103832_030--Hb_083103_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0.0987751
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 6.01452 0 5.31464 0

CAGE analysis