Hb_001926_030

Information

Type -
Description -
Location Contig1926: 23270-30798
Sequence    

Annotation

kegg
ID rcu:RCOM_1012890
description Apoptosis inhibitor, putative
nr
ID XP_012091711.1
description PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
swissprot
ID Q5R644
description Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1
trembl
ID A0A067JM14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21516 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_19191: 22887-30705 , PASA_asmbl_19192: 24555-24987 , PASA_asmbl_19194: 31652-33966
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_001926_030 0.0 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
2 Hb_004055_150 0.0418353423 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000879_200 0.0472283581 - - PREDICTED: A-kinase anchor protein 17A [Jatropha curcas]
4 Hb_002686_250 0.0529404509 - - PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein isoform X1 [Jatropha curcas]
5 Hb_006620_020 0.0575398309 - - PREDICTED: uncharacterized protein LOC105638878 [Jatropha curcas]
6 Hb_000853_230 0.0577758471 - - syntaxin, putative [Ricinus communis]
7 Hb_000010_400 0.0578643705 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 67 [Jatropha curcas]
8 Hb_008803_090 0.0609299002 - - PREDICTED: COP9 signalosome complex subunit 6a [Jatropha curcas]
9 Hb_001595_030 0.0635929953 - - PREDICTED: nuclear inhibitor of protein phosphatase 1 isoform X1 [Jatropha curcas]
10 Hb_033720_010 0.0647018099 - - PREDICTED: uncharacterized protein LOC105648843 [Jatropha curcas]
11 Hb_003464_050 0.0664138037 - - hypothetical protein POPTR_0006s11880g [Populus trichocarpa]
12 Hb_002078_020 0.0668623744 - - PREDICTED: proteasome subunit beta type-5 [Jatropha curcas]
13 Hb_005993_050 0.0677373186 - - Protein AFR, putative [Ricinus communis]
14 Hb_000179_030 0.0677745375 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
15 Hb_000308_030 0.0695219657 - - PREDICTED: uncharacterized protein LOC105639686 [Jatropha curcas]
16 Hb_009646_030 0.069565642 - - conserved hypothetical protein [Ricinus communis]
17 Hb_106552_050 0.0696670117 - - PREDICTED: uncharacterized protein LOC105642134 [Jatropha curcas]
18 Hb_011995_010 0.0708122244 - - dc50, putative [Ricinus communis]
19 Hb_000498_010 0.0721665019 - - PREDICTED: protease Do-like 10, mitochondrial isoform X1 [Jatropha curcas]
20 Hb_131646_010 0.0729451949 - - protein arginine n-methyltransferase, putative [Ricinus communis]

Gene co-expression network

sample Hb_001926_030 Hb_001926_030 Hb_004055_150 Hb_004055_150 Hb_001926_030--Hb_004055_150 Hb_000879_200 Hb_000879_200 Hb_001926_030--Hb_000879_200 Hb_002686_250 Hb_002686_250 Hb_001926_030--Hb_002686_250 Hb_006620_020 Hb_006620_020 Hb_001926_030--Hb_006620_020 Hb_000853_230 Hb_000853_230 Hb_001926_030--Hb_000853_230 Hb_000010_400 Hb_000010_400 Hb_001926_030--Hb_000010_400 Hb_004055_150--Hb_002686_250 Hb_004055_150--Hb_000853_230 Hb_004055_150--Hb_006620_020 Hb_006960_050 Hb_006960_050 Hb_004055_150--Hb_006960_050 Hb_005993_050 Hb_005993_050 Hb_004055_150--Hb_005993_050 Hb_000879_200--Hb_006620_020 Hb_001595_030 Hb_001595_030 Hb_000879_200--Hb_001595_030 Hb_000879_200--Hb_000853_230 Hb_002518_280 Hb_002518_280 Hb_000879_200--Hb_002518_280 Hb_023386_020 Hb_023386_020 Hb_000879_200--Hb_023386_020 Hb_131646_010 Hb_131646_010 Hb_002686_250--Hb_131646_010 Hb_003029_030 Hb_003029_030 Hb_002686_250--Hb_003029_030 Hb_004785_100 Hb_004785_100 Hb_002686_250--Hb_004785_100 Hb_002078_110 Hb_002078_110 Hb_002686_250--Hb_002078_110 Hb_006620_020--Hb_000853_230 Hb_054865_100 Hb_054865_100 Hb_006620_020--Hb_054865_100 Hb_000174_110 Hb_000174_110 Hb_006620_020--Hb_000174_110 Hb_000390_180 Hb_000390_180 Hb_000853_230--Hb_000390_180 Hb_033720_010 Hb_033720_010 Hb_000853_230--Hb_033720_010 Hb_011995_010 Hb_011995_010 Hb_000010_400--Hb_011995_010 Hb_007813_040 Hb_007813_040 Hb_000010_400--Hb_007813_040 Hb_000302_270 Hb_000302_270 Hb_000010_400--Hb_000302_270 Hb_077562_050 Hb_077562_050 Hb_000010_400--Hb_077562_050 Hb_000521_320 Hb_000521_320 Hb_000010_400--Hb_000521_320
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
50.7409 34.2588 37.0802 22.9387 47.1438 48.7957
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.3274 35.0471 37.2833 25.2633 20.6056

CAGE analysis