Hb_023386_020

Information

Type -
Description -
Location Contig23386: 12794-15588
Sequence    

Annotation

kegg
ID rcu:RCOM_1060980
description Chaperone protein dnaJ, putative
nr
ID XP_012069978.1
description PREDICTED: chaperone protein dnaJ 13 isoform X2 [Jatropha curcas]
swissprot
ID Q39079
description Chaperone protein dnaJ 13 OS=Arabidopsis thaliana GN=ATJ13 PE=1 SV=2
trembl
ID A0A067KUQ3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_03398 PE=4 SV=1
Gene Ontology
ID GO:0009536
description chaperone protein dnaj 13

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_24558: 12821-24756
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_023386_020 0.0 - - PREDICTED: chaperone protein dnaJ 13 isoform X2 [Jatropha curcas]
2 Hb_004100_080 0.0437132771 - - conserved hypothetical protein [Ricinus communis]
3 Hb_000926_190 0.0498312096 - - PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 [Jatropha curcas]
4 Hb_002518_280 0.0520313747 - - phosphate transporter [Manihot esculenta]
5 Hb_033720_010 0.0528064256 - - PREDICTED: uncharacterized protein LOC105648843 [Jatropha curcas]
6 Hb_156973_010 0.0555614524 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000879_200 0.0563194857 - - PREDICTED: A-kinase anchor protein 17A [Jatropha curcas]
8 Hb_000029_050 0.0587841187 - - expressed protein, putative [Ricinus communis]
9 Hb_004841_010 0.0599078099 - - PREDICTED: 60S ribosomal protein L2, mitochondrial [Jatropha curcas]
10 Hb_165928_020 0.0607671351 - - PREDICTED: zinc finger protein VAR3, chloroplastic [Jatropha curcas]
11 Hb_001258_090 0.0637813098 - - PREDICTED: protein spt2-like [Jatropha curcas]
12 Hb_003878_070 0.0655119725 - - PREDICTED: rab3 GTPase-activating protein non-catalytic subunit isoform X1 [Jatropha curcas]
13 Hb_000856_110 0.065794808 - - PREDICTED: uncharacterized protein LOC105640477 isoform X2 [Jatropha curcas]
14 Hb_008643_210 0.0663464384 - - PREDICTED: uncharacterized protein LOC105644223 isoform X1 [Jatropha curcas]
15 Hb_004412_010 0.0665723298 - - -
16 Hb_000038_170 0.0671244384 - - PREDICTED: SCY1-like protein 2 [Jatropha curcas]
17 Hb_000160_210 0.0674829143 - - conserved hypothetical protein [Ricinus communis]
18 Hb_005779_080 0.0694564094 - - PREDICTED: E3 ubiquitin-protein ligase BRE1-like 1 isoform X1 [Jatropha curcas]
19 Hb_000484_030 0.0698168768 - - PREDICTED: probable 26S proteasome non-ATPase regulatory subunit 3 [Jatropha curcas]
20 Hb_000165_250 0.0699900548 - - PREDICTED: ankyrin repeat and SAM domain-containing protein 3-like [Jatropha curcas]

Gene co-expression network

sample Hb_023386_020 Hb_023386_020 Hb_004100_080 Hb_004100_080 Hb_023386_020--Hb_004100_080 Hb_000926_190 Hb_000926_190 Hb_023386_020--Hb_000926_190 Hb_002518_280 Hb_002518_280 Hb_023386_020--Hb_002518_280 Hb_033720_010 Hb_033720_010 Hb_023386_020--Hb_033720_010 Hb_156973_010 Hb_156973_010 Hb_023386_020--Hb_156973_010 Hb_000879_200 Hb_000879_200 Hb_023386_020--Hb_000879_200 Hb_000856_110 Hb_000856_110 Hb_004100_080--Hb_000856_110 Hb_000160_210 Hb_000160_210 Hb_004100_080--Hb_000160_210 Hb_004841_010 Hb_004841_010 Hb_004100_080--Hb_004841_010 Hb_007657_010 Hb_007657_010 Hb_004100_080--Hb_007657_010 Hb_004412_010 Hb_004412_010 Hb_004100_080--Hb_004412_010 Hb_023386_040 Hb_023386_040 Hb_000926_190--Hb_023386_040 Hb_007054_060 Hb_007054_060 Hb_000926_190--Hb_007054_060 Hb_000334_270 Hb_000334_270 Hb_000926_190--Hb_000334_270 Hb_000794_050 Hb_000794_050 Hb_000926_190--Hb_000794_050 Hb_000926_190--Hb_000879_200 Hb_000038_170 Hb_000038_170 Hb_002518_280--Hb_000038_170 Hb_010618_010 Hb_010618_010 Hb_002518_280--Hb_010618_010 Hb_000152_380 Hb_000152_380 Hb_002518_280--Hb_000152_380 Hb_002518_280--Hb_000879_200 Hb_004310_150 Hb_004310_150 Hb_002518_280--Hb_004310_150 Hb_000853_230 Hb_000853_230 Hb_033720_010--Hb_000853_230 Hb_033720_010--Hb_000879_200 Hb_002686_250 Hb_002686_250 Hb_033720_010--Hb_002686_250 Hb_033720_010--Hb_000794_050 Hb_006620_020 Hb_006620_020 Hb_033720_010--Hb_006620_020 Hb_002175_030 Hb_002175_030 Hb_156973_010--Hb_002175_030 Hb_003125_160 Hb_003125_160 Hb_156973_010--Hb_003125_160 Hb_001258_090 Hb_001258_090 Hb_156973_010--Hb_001258_090 Hb_156973_010--Hb_000853_230 Hb_000403_050 Hb_000403_050 Hb_156973_010--Hb_000403_050 Hb_001926_030 Hb_001926_030 Hb_000879_200--Hb_001926_030 Hb_000879_200--Hb_006620_020 Hb_001595_030 Hb_001595_030 Hb_000879_200--Hb_001595_030 Hb_000879_200--Hb_000853_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
12.4705 8.78315 7.93636 6.1727 12.3034 13.6358
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
9.04313 11.4391 7.84521 7.02329 9.4332

CAGE analysis